| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523667
Identifier: 222523667
GI number: 222523667
Start: 440376
End: 441404
Strand: Reverse
Name: 222523667
Synonym: Chy400_0373
Alternate gene names: NA
Gene position: 441404-440376 (Counterclockwise)
Preceding gene: 222523669
Following gene: 222523662
Centisome position: 8.38
GC content: 59.57
Gene sequence:
>1029_bases ATGTCGCACCAGATTGAAATCGTCGTACCGGCCGGGCTGGAAGAACTGGCGCGTGCGGAAGCACTGCGCATAACCGGCTT ACGTCTTGAACCGCTGACCGAACGTGGTGTCATTAGAGCGACGATGCATGGTTCGTTGCAGGCACTGTTCGATCTGCGAT CTGTCATATCAGTCTTCGTTGTTCGTCGGTTTGCAATACCCCGTCCGCGGGCACTACTCGGTGATGAGCATTTTCGGGCG GTGGTCGCGATGCTTGAGATGGTGCGTCGCCTGCATCCGGCAGGGACATTTCAGACCCTCTTTCTCAGCGCGGCTGGCGC CGATAGCAGTGTTCTGCAACGATTTAAGCAGATGATCGGCGAACGGCTTGGTCTGGCGATTGGCACGGAAGACGGCGACA TGCTGATCCGATTACGGCCGAGCCGGGATCGGAGTGGTTGGGATGTGCTGGTCCGTCTCACGCCACGCCCTTTAGCGACG CGCTCGTGGCGGGTGTGTAATCGCGAAGGGGCGCTGAATGGGCCGGTTGCACACGCAATGGCAGTGCTGAGTAAGCCACA TGCCGGAGATCGAGTGCTGAATGTCGGATGCGGTTCGGGGACGCTACTGATCGAGCGCTTACTCATCACAACGGCAGCAC AGGCAATTGGCTGTGACACCGATCCTACGGCACTGGCCTGCGCCTGGCGTAATCTAGGGGCTGCGGGTTTGAGTAAGCGG GTAGAACTGTACGATTGGGATGCCTGTCAGTTGCCGCTTCCTTCGGCGAGTATTGACGTAGTGCTCGCCGATCTGCCGTT TGGTCATCTGGTTGGCTCGCACACCACCAATCTCACCCTCTACCCGGCACTGCTGGCCGAAGCGGCGCGGGTGACTCGTC CGGGCGGAAGAGCCGTGCTGATCAGCCACGAAGTGCGGTTGATGGAACGTTCGCTGGCTACGCTCCCGCAGTGGCGTGTT GATCAACAACTGCGCGTCGATTTGGGTGGGCTTTACCCGCGCATCTTCGTGTTACGGCGTACCGGGTAA
Upstream 100 bases:
>100_bases CATAATTGTCACGTGTAACAGGATTATCTGCTATGATGATGCGCATTGTCTACCCTGCCCATCTGGTAAGGGCAGGTACG GATGAGTATATAGTATAACA
Downstream 100 bases:
>100_bases TATCGAATCTGGTTTAATAGTTGTTATGACCTGCTATCTACTGTCACCCTGACACCGTGGTTGTAAGCGCTCCACCCCTG TACGCGAACGCTATTCCTCT
Product: putative RNA methylase
Products: NA
Alternate protein names: N6-Adenine-Specific DNA Methylase; Methyltransferase; THUMP Domain/Methyltransferase Domain-Containing Protein; RNA Methyltransferase; N6-Adenine-Specific RNA Methylase
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSHQIEIVVPAGLEELARAEALRITGLRLEPLTERGVIRATMHGSLQALFDLRSVISVFVVRRFAIPRPRALLGDEHFRA VVAMLEMVRRLHPAGTFQTLFLSAAGADSSVLQRFKQMIGERLGLAIGTEDGDMLIRLRPSRDRSGWDVLVRLTPRPLAT RSWRVCNREGALNGPVAHAMAVLSKPHAGDRVLNVGCGSGTLLIERLLITTAAQAIGCDTDPTALACAWRNLGAAGLSKR VELYDWDACQLPLPSASIDVVLADLPFGHLVGSHTTNLTLYPALLAEAARVTRPGGRAVLISHEVRLMERSLATLPQWRV DQQLRVDLGGLYPRIFVLRRTG
Sequences:
>Translated_342_residues MSHQIEIVVPAGLEELARAEALRITGLRLEPLTERGVIRATMHGSLQALFDLRSVISVFVVRRFAIPRPRALLGDEHFRA VVAMLEMVRRLHPAGTFQTLFLSAAGADSSVLQRFKQMIGERLGLAIGTEDGDMLIRLRPSRDRSGWDVLVRLTPRPLAT RSWRVCNREGALNGPVAHAMAVLSKPHAGDRVLNVGCGSGTLLIERLLITTAAQAIGCDTDPTALACAWRNLGAAGLSKR VELYDWDACQLPLPSASIDVVLADLPFGHLVGSHTTNLTLYPALLAEAARVTRPGGRAVLISHEVRLMERSLATLPQWRV DQQLRVDLGGLYPRIFVLRRTG >Mature_341_residues SHQIEIVVPAGLEELARAEALRITGLRLEPLTERGVIRATMHGSLQALFDLRSVISVFVVRRFAIPRPRALLGDEHFRAV VAMLEMVRRLHPAGTFQTLFLSAAGADSSVLQRFKQMIGERLGLAIGTEDGDMLIRLRPSRDRSGWDVLVRLTPRPLATR SWRVCNREGALNGPVAHAMAVLSKPHAGDRVLNVGCGSGTLLIERLLITTAAQAIGCDTDPTALACAWRNLGAAGLSKRV ELYDWDACQLPLPSASIDVVLADLPFGHLVGSHTTNLTLYPALLAEAARVTRPGGRAVLISHEVRLMERSLATLPQWRVD QQLRVDLGGLYPRIFVLRRTG
Specific function: Unknown
COG id: COG0116
COG function: function code L; Predicted N6-adenine-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI166197708, Length=185, Percent_Identity=32.972972972973, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI166197706, Length=185, Percent_Identity=32.972972972973, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI254553431, Length=162, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32566195, Length=222, Percent_Identity=31.981981981982, Blast_Score=101, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37421; Mature: 37290
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQIEIVVPAGLEELARAEALRITGLRLEPLTERGVIRATMHGSLQALFDLRSVISVFV CCCEEEEEECCCHHHHHHHHHHEEECEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH VRRFAIPRPRALLGDEHFRAVVAMLEMVRRLHPAGTFQTLFLSAAGADSSVLQRFKQMIG HHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCHHHHHHHHHHHH ERLGLAIGTEDGDMLIRLRPSRDRSGWDVLVRLTPRPLATRSWRVCNREGALNGPVAHAM HHHCEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCHHHHHH AVLSKPHAGDRVLNVGCGSGTLLIERLLITTAAQAIGCDTDPTALACAWRNLGAAGLSKR HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCC VELYDWDACQLPLPSASIDVVLADLPFGHLVGSHTTNLTLYPALLAEAARVTRPGGRAVL EEEEECCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCEEE ISHEVRLMERSLATLPQWRVDQQLRVDLGGLYPRIFVLRRTG EEHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure SHQIEIVVPAGLEELARAEALRITGLRLEPLTERGVIRATMHGSLQALFDLRSVISVFV CCEEEEEECCCHHHHHHHHHHEEECEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH VRRFAIPRPRALLGDEHFRAVVAMLEMVRRLHPAGTFQTLFLSAAGADSSVLQRFKQMIG HHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCHHHHHHHHHHHH ERLGLAIGTEDGDMLIRLRPSRDRSGWDVLVRLTPRPLATRSWRVCNREGALNGPVAHAM HHHCEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCHHHHHH AVLSKPHAGDRVLNVGCGSGTLLIERLLITTAAQAIGCDTDPTALACAWRNLGAAGLSKR HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCC VELYDWDACQLPLPSASIDVVLADLPFGHLVGSHTTNLTLYPALLAEAARVTRPGGRAVL EEEEECCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCEEE ISHEVRLMERSLATLPQWRVDQQLRVDLGGLYPRIFVLRRTG EEHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA