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The map label for this gene is ybbK [C]

Identifier: 222523629

GI number: 222523629

Start: 400093

End: 401028

Strand: Direct

Name: ybbK [C]

Synonym: Chy400_0335

Alternate gene names: 222523629

Gene position: 400093-401028 (Clockwise)

Preceding gene: 222523618

Following gene: 222523630

Centisome position: 7.59

GC content: 56.94

Gene sequence:

>936_bases
ATGAATCAGAATCGTCAACCATTTCCTACCTCAACCATGCGCGGATGGTCAATGTCAGCAGCGGTCGGGATTGTGCTGCT
GATCATGATTGCCATCTTTGTTGTCAGCAACTCAGTAACCACCATTGAAGCCGGTACCCGCGGTGTGTTGAAGACGTTCG
GCGAGATTACCGGCGTGCTTGACGAAGGACTGCATTTCCGCACTCCTTTCATCACCTCGGTCACAGTGGTTGAAGTTCGT
ACTCAACGCTACGAGTCGAACTCAAGTGCTGCCTCGCGTGACCTTCAGACCGTAACTACCCAGGTTGTCATCAACTATCG
TCCTGACGCCTCGCAGGTTGATCGACTGGTGCGCGAGATCGGTGTAGATTACGAGCGCCGGGTTGTTGATCCAGCCATTC
AGGAGGCGCTCAAGGCTGCAACTGCTCGCTTCACTGCCGAAGAGCTGATCACTCGCCGACCCGAAGTGTCGGACTTGATC
CTGAACATCTTGAGTGAACGGCTGACCCCACGCGGTGTGATTGTCGAGAGTGTTTCAATCACCGACTTCAATTTCAGCCC
TGAATTTGCCCGTGCCATCGAAGCCAAGCAGGTCGCCGAACAAGATGCCCTGCGCGCCGCACGCGAACTTGAGCGGGCAC
GGATCGAGGCGCAGCAGCAGGTAGCGCGCGCCGAAGCCGAAGCCAAAGCGCGCCTGGAAATTGCCCGCGCCGAAGCCGAG
TCGCTGCGGTTGCTCGGTGAAGTCGTTAGCCCGCAACTGCTCCAATTGCGCTTCATCGAACGTTGGGACGGCATCCTCCC
CCGTCTGGTGAGTGGTGACAACGGCTTGCTGACAATGTTGAGCATTCCAACCGATGGTATGCTCGGTGAAACACCAACCG
CTCAACCAACACCCCCGAACAGCGAACAACCGACGGGAACAACGGGTGGTGAGTAG

Upstream 100 bases:

>100_bases
GTACCATCCGAATCAGGTATACTGCCATTATAGAGATATTTAGCCTGTCAATCAACGGTTTTGTAATCAATGTCAGGTGA
TATATAGAAGGAGCAAAACG

Downstream 100 bases:

>100_bases
GAGCGTGCGTAGCTAAGGGATTAAGAGAAAACGATAATGAAGTGAACAGGGTTTAGCAGTGTTGATCAGGTCAGAATAAG
CTGTTAATTGCCCCCTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Prohibitin; SPFH Domain / Band 7 Family Protein; SPFH Domain Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Band 7 Family Protein; HflC Protein; Band 7 Protein Like; Spfh Domain Band 7 Family Protein; Prohibitin Family Protein; B-Cell Receptor Associated Protein-Related Protein; SPFH Domain / Band 7 Family / Prohibitin Protein; Band 7 Protein Cation Conductance; Membrane Protease Complex Subunit; HflC/HflK Family Protein; Prohibitin Protein

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNQNRQPFPTSTMRGWSMSAAVGIVLLIMIAIFVVSNSVTTIEAGTRGVLKTFGEITGVLDEGLHFRTPFITSVTVVEVR
TQRYESNSSAASRDLQTVTTQVVINYRPDASQVDRLVREIGVDYERRVVDPAIQEALKAATARFTAEELITRRPEVSDLI
LNILSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEAKARLEIARAEAE
SLRLLGEVVSPQLLQLRFIERWDGILPRLVSGDNGLLTMLSIPTDGMLGETPTAQPTPPNSEQPTGTTGGE

Sequences:

>Translated_311_residues
MNQNRQPFPTSTMRGWSMSAAVGIVLLIMIAIFVVSNSVTTIEAGTRGVLKTFGEITGVLDEGLHFRTPFITSVTVVEVR
TQRYESNSSAASRDLQTVTTQVVINYRPDASQVDRLVREIGVDYERRVVDPAIQEALKAATARFTAEELITRRPEVSDLI
LNILSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEAKARLEIARAEAE
SLRLLGEVVSPQLLQLRFIERWDGILPRLVSGDNGLLTMLSIPTDGMLGETPTAQPTPPNSEQPTGTTGGE
>Mature_311_residues
MNQNRQPFPTSTMRGWSMSAAVGIVLLIMIAIFVVSNSVTTIEAGTRGVLKTFGEITGVLDEGLHFRTPFITSVTVVEVR
TQRYESNSSAASRDLQTVTTQVVINYRPDASQVDRLVREIGVDYERRVVDPAIQEALKAATARFTAEELITRRPEVSDLI
LNILSERLTPRGVIVESVSITDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEAKARLEIARAEAE
SLRLLGEVVSPQLLQLRFIERWDGILPRLVSGDNGLLTMLSIPTDGMLGETPTAQPTPPNSEQPTGTTGGE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6005854, Length=264, Percent_Identity=34.8484848484849, Blast_Score=144, Evalue=8e-35,
Organism=Homo sapiens, GI221307584, Length=264, Percent_Identity=34.8484848484849, Blast_Score=144, Evalue=8e-35,
Organism=Homo sapiens, GI4505773, Length=253, Percent_Identity=35.5731225296443, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI193205005, Length=255, Percent_Identity=36.078431372549, Blast_Score=141, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17509869, Length=188, Percent_Identity=32.9787234042553, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6321670, Length=198, Percent_Identity=37.3737373737374, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6321571, Length=244, Percent_Identity=35.2459016393443, Blast_Score=132, Evalue=7e-32,
Organism=Drosophila melanogaster, GI161077242, Length=263, Percent_Identity=33.8403041825095, Blast_Score=138, Evalue=5e-33,
Organism=Drosophila melanogaster, GI161077244, Length=263, Percent_Identity=33.8403041825095, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI161077238, Length=263, Percent_Identity=33.8403041825095, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI161077236, Length=263, Percent_Identity=33.8403041825095, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI161077234, Length=263, Percent_Identity=33.8403041825095, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI161077240, Length=263, Percent_Identity=33.8403041825095, Blast_Score=137, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24585145, Length=261, Percent_Identity=31.8007662835249, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24585147, Length=261, Percent_Identity=31.8007662835249, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI281365192, Length=265, Percent_Identity=28.6792452830189, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34184; Mature: 34184

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNRQPFPTSTMRGWSMSAAVGIVLLIMIAIFVVSNSVTTIEAGTRGVLKTFGEITGVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH
DEGLHFRTPFITSVTVVEVRTQRYESNSSAASRDLQTVTTQVVINYRPDASQVDRLVREI
HCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHH
GVDYERRVVDPAIQEALKAATARFTAEELITRRPEVSDLILNILSERLTPRGVIVESVSI
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEE
TDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEAKARLEIARAEAE
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRLLGEVVSPQLLQLRFIERWDGILPRLVSGDNGLLTMLSIPTDGMLGETPTAQPTPPN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
SEQPTGTTGGE
CCCCCCCCCCC
>Mature Secondary Structure
MNQNRQPFPTSTMRGWSMSAAVGIVLLIMIAIFVVSNSVTTIEAGTRGVLKTFGEITGVL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH
DEGLHFRTPFITSVTVVEVRTQRYESNSSAASRDLQTVTTQVVINYRPDASQVDRLVREI
HCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHH
GVDYERRVVDPAIQEALKAATARFTAEELITRRPEVSDLILNILSERLTPRGVIVESVSI
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEE
TDFNFSPEFARAIEAKQVAEQDALRAARELERARIEAQQQVARAEAEAKARLEIARAEAE
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRLLGEVVSPQLLQLRFIERWDGILPRLVSGDNGLLTMLSIPTDGMLGETPTAQPTPPN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
SEQPTGTTGGE
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA