| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523605
Identifier: 222523605
GI number: 222523605
Start: 373350
End: 374861
Strand: Reverse
Name: 222523605
Synonym: Chy400_0311
Alternate gene names: NA
Gene position: 374861-373350 (Counterclockwise)
Preceding gene: 222523606
Following gene: 222523604
Centisome position: 7.11
GC content: 65.67
Gene sequence:
>1512_bases ATGAGCAATCTGACGATAAACCGGATCGGCCCGGAAGCGCAGGCCGATAGCGCATGGCACGATGAGGATGTAGAGGCGGC GCGCTTTGCGGCGTTGGATGTGCGCCCGGCACCGGCCCGCTGGCGCGGGCGCGACGCCCTCGGCGTTGCACTGGCCGGGC TGGTCGCGTTGGGCGGCTGGTTAGCGCTGGTGATCGTGTTTTGGGTGGCGGCCCGCATTACCGAGAGCGCCTACCCGCCC GCGCCGGGTTGGGTGCTCTTTTGGCAGGTGTTGTTGGGCATCACGGCGAGCGCGCCGGCTTGGTTGGGCATACTGGCCGC CAGCGTCTGGGTGTATGAACGGCGCATCTATGCGCGCCGAGCGAATGTCATCCGCGACAAGCTTATGAACCCGGTGCCGG CGCACTTGATCAACCAATTGACCTTGCCGAGCTACTACGCCCTCTTTGAGCGCGCGGCGGCCCTTGAGCGTGAGGTAGCG CCGTATCGCGCCTACCGGGGTGTTGAAAGCCTCAGCCTCAGCGCCTCGGCAGCGAAGCCGAGCGGCGAAGAGGCGCGCAA GGCGCTAGAAAGCGTTGTAACGCCAGCGATTGAGCGGCTTGATGACTGGGTGACGGATGTGGCGGCGCGGGAAGCGCACA TCTTGGTATCCGGCAAGACGGCCAGCGGCAAAACAACAACGGGAGCGGCACTCTTGGCGCGCCGGATTGACGCCGGCGAT GCCATCTGCGTGATCGATCCGCATCACGAACCCGGCAAATGGTGGGGGATTGATGCGATCGGGGCGGGCCGCGATTATGC GGCCATCGGCGCGGCGCTGGACGCGCTCGATGCCGAGATGACCGAACGCTATCGCCGGCTGGCTGATGGTGAGCCGCCCG GCCAGCGGCTCACGGTGCTGATCGATGAAGCACCGGCCATCGCTGCCGCGCTGGAACGGCGCTGGAAGGCGTTAGCAACC CGGCTCGGCAGTGAGGCGCGCAAGGTAGGCATCGCGCTCATCATCCTGAGCCAAAGCCCGTTAGTGGAAGACCTGATGAT GAACTCGGTGATGCGCCGGAACTACACCATCATCGGACTGGACATGGCCAGCATCCGCGTCATGCTGCGCGATGCCCGCA ATGCCCGCGACATCCTAGCGACGCTGGAAGGCCGGCCCTATCCGGCGCTGCGTGAGGTAGACGGCGAGTTTCGCATCTGC GACCGCACCGGCATTCATCAGGTGCGCCCGCAGCGATCGCCGAACGTCTGGCGTCTGCCAGTCTGCGATGAGGCCGCCAG CGGGCCGGCACAGACAGACAGACGCGCAGACGCCGAGACGATTGAGCGACTGAAGGCGTTCATCCGGGCCGGCATCACGC GCGATGAGGCCCGCGCCCAAGGCGTCGCGTTTGACAATAGCGATTGGACGCGGGCGCGGCGTGAGGTAGAGGCCGAAACG GAACTGCTCAATGGGCTACTGGTTGCAAGCCCGCGTGACGGCTTGCGTGCCACTACGGAGGTGCAAGGATGA
Upstream 100 bases:
>100_bases CATCCGCGCCGAGCGCATTAGGACGGCTTAAACGGCTGTCACACCTACCGATGGCGGTAGGTGTGACAAGGTGTGACAGG TGTGACAGCGGAGGTGCGCG
Downstream 100 bases:
>100_bases AGCGGCATATCGGCTTAGCCATTCACGGCGGTTTGGCGCTGGTGATTGTTGGATGGTCGCTCTGGGGGGCTTACACGTTT TGGCAATTCGTGTTTCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MSNLTINRIGPEAQADSAWHDEDVEAARFAALDVRPAPARWRGRDALGVALAGLVALGGWLALVIVFWVAARITESAYPP APGWVLFWQVLLGITASAPAWLGILAASVWVYERRIYARRANVIRDKLMNPVPAHLINQLTLPSYYALFERAAALEREVA PYRAYRGVESLSLSASAAKPSGEEARKALESVVTPAIERLDDWVTDVAAREAHILVSGKTASGKTTTGAALLARRIDAGD AICVIDPHHEPGKWWGIDAIGAGRDYAAIGAALDALDAEMTERYRRLADGEPPGQRLTVLIDEAPAIAAALERRWKALAT RLGSEARKVGIALIILSQSPLVEDLMMNSVMRRNYTIIGLDMASIRVMLRDARNARDILATLEGRPYPALREVDGEFRIC DRTGIHQVRPQRSPNVWRLPVCDEAASGPAQTDRRADAETIERLKAFIRAGITRDEARAQGVAFDNSDWTRARREVEAET ELLNGLLVASPRDGLRATTEVQG
Sequences:
>Translated_503_residues MSNLTINRIGPEAQADSAWHDEDVEAARFAALDVRPAPARWRGRDALGVALAGLVALGGWLALVIVFWVAARITESAYPP APGWVLFWQVLLGITASAPAWLGILAASVWVYERRIYARRANVIRDKLMNPVPAHLINQLTLPSYYALFERAAALEREVA PYRAYRGVESLSLSASAAKPSGEEARKALESVVTPAIERLDDWVTDVAAREAHILVSGKTASGKTTTGAALLARRIDAGD AICVIDPHHEPGKWWGIDAIGAGRDYAAIGAALDALDAEMTERYRRLADGEPPGQRLTVLIDEAPAIAAALERRWKALAT RLGSEARKVGIALIILSQSPLVEDLMMNSVMRRNYTIIGLDMASIRVMLRDARNARDILATLEGRPYPALREVDGEFRIC DRTGIHQVRPQRSPNVWRLPVCDEAASGPAQTDRRADAETIERLKAFIRAGITRDEARAQGVAFDNSDWTRARREVEAET ELLNGLLVASPRDGLRATTEVQG >Mature_502_residues SNLTINRIGPEAQADSAWHDEDVEAARFAALDVRPAPARWRGRDALGVALAGLVALGGWLALVIVFWVAARITESAYPPA PGWVLFWQVLLGITASAPAWLGILAASVWVYERRIYARRANVIRDKLMNPVPAHLINQLTLPSYYALFERAAALEREVAP YRAYRGVESLSLSASAAKPSGEEARKALESVVTPAIERLDDWVTDVAAREAHILVSGKTASGKTTTGAALLARRIDAGDA ICVIDPHHEPGKWWGIDAIGAGRDYAAIGAALDALDAEMTERYRRLADGEPPGQRLTVLIDEAPAIAAALERRWKALATR LGSEARKVGIALIILSQSPLVEDLMMNSVMRRNYTIIGLDMASIRVMLRDARNARDILATLEGRPYPALREVDGEFRICD RTGIHQVRPQRSPNVWRLPVCDEAASGPAQTDRRADAETIERLKAFIRAGITRDEARAQGVAFDNSDWTRARREVEAETE LLNGLLVASPRDGLRATTEVQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55014; Mature: 54883
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLTINRIGPEAQADSAWHDEDVEAARFAALDVRPAPARWRGRDALGVALAGLVALGGW CCCCEECCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LALVIVFWVAARITESAYPPAPGWVLFWQVLLGITASAPAWLGILAASVWVYERRIYARR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ANVIRDKLMNPVPAHLINQLTLPSYYALFERAAALEREVAPYRAYRGVESLSLSASAAKP HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC SGEEARKALESVVTPAIERLDDWVTDVAAREAHILVSGKTASGKTTTGAALLARRIDAGD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCC AICVIDPHHEPGKWWGIDAIGAGRDYAAIGAALDALDAEMTERYRRLADGEPPGQRLTVL EEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE IDEAPAIAAALERRWKALATRLGSEARKVGIALIILSQSPLVEDLMMNSVMRRNYTIIGL EECCHHHHHHHHHHHHHHHHHHCHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEE DMASIRVMLRDARNARDILATLEGRPYPALREVDGEFRICDRTGIHQVRPQRSPNVWRLP CHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCEEEECCCCCHHCCCCCCCCEEECC VCDEAASGPAQTDRRADAETIERLKAFIRAGITRDEARAQGVAFDNSDWTRARREVEAET CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEECCCHHHHHHHHHHHHH ELLNGLLVASPRDGLRATTEVQG HHHCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SNLTINRIGPEAQADSAWHDEDVEAARFAALDVRPAPARWRGRDALGVALAGLVALGGW CCCEECCCCCCCCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LALVIVFWVAARITESAYPPAPGWVLFWQVLLGITASAPAWLGILAASVWVYERRIYARR HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ANVIRDKLMNPVPAHLINQLTLPSYYALFERAAALEREVAPYRAYRGVESLSLSASAAKP HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC SGEEARKALESVVTPAIERLDDWVTDVAAREAHILVSGKTASGKTTTGAALLARRIDAGD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHCCCCC AICVIDPHHEPGKWWGIDAIGAGRDYAAIGAALDALDAEMTERYRRLADGEPPGQRLTVL EEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE IDEAPAIAAALERRWKALATRLGSEARKVGIALIILSQSPLVEDLMMNSVMRRNYTIIGL EECCHHHHHHHHHHHHHHHHHHCHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEE DMASIRVMLRDARNARDILATLEGRPYPALREVDGEFRICDRTGIHQVRPQRSPNVWRLP CHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCEEEECCCCCHHCCCCCCCCEEECC VCDEAASGPAQTDRRADAETIERLKAFIRAGITRDEARAQGVAFDNSDWTRARREVEAET CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCEECCCHHHHHHHHHHHHH ELLNGLLVASPRDGLRATTEVQG HHHCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA