| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523508
Identifier: 222523508
GI number: 222523508
Start: 254230
End: 255054
Strand: Reverse
Name: 222523508
Synonym: Chy400_0214
Alternate gene names: NA
Gene position: 255054-254230 (Counterclockwise)
Preceding gene: 222523509
Following gene: 222523507
Centisome position: 4.84
GC content: 56.12
Gene sequence:
>825_bases ATGATTGGGCGCAATCGAGTTCAAGTCGTTACCGAAGCCATTACTCTCCAGTATGCAAATGGCAAAAGCATGGCCCGCCC GATTGGTGGCAAGCGTTTTACTCCTTACATCGGTTTCCATATTGAAGTCGGGCGCGACGATGAACTCGATGCCCGTTTAG GCATTGCCGGTATTCCTCAAATCGAAATCAAGCATCAGCGGCAAGGCGGTGCTGAGATTGTGCGGCACTGGGCACTGGGT GAGACCATCCTTTTCTACCCTGTGACCAGTGGCCCGGTTGCGCAAACAGTAGCCGGCAGCCTTGGTCGCAATGCTGCTGC TACTGCTGCAGCGGGAATTGGTTTGCGCTGGGGAATCAATGATCGGAGCCGAATGGCGGTGCGCGGCTACCTTGACCTGC TGGTGCGGGTAGAGATGGCACGGCTGGTTCAGTTATCGGTGCGCTCACGGATGAGCGATGTCTTGCTCAATGTCTTGCTC GATCACGGAAGGGTGTGTGAAGCGGCTGACCATCTGATCGACCGATCCTCCCATCCCGATCTGGTAACCTTTCACGAGCT GGCACTCCCGCTCGGTCCCGGTGAAGAAGAAGAGTGGGGGAAGGGCGAAACCACAACGGTCGTTCCATTCAAGAGTCTCC ATCCGGCTCAGATTGATCGTGATTACATTCAGCGAATCTGGCGACCGGAGAGTGTTCATCAGGCTGCATTGCGCGATTGG GCAGGTATTCAGGCCTGGGCCAGCGAGTACGCCCTCCAAAATGACGAGCGTGTCACTGGTGAACGGAATGACGTAGTCGA GACGTCGCACGAGATAGGTCGCTGA
Upstream 100 bases:
>100_bases CTTTCGCCTTCTACCAATTGCCAAATCTCTTTACAAAAAAGAACATATGTGCTATTATTGCGCCAGGATACCGTACGTGC AAGGAAGAGGAGCAAACATT
Downstream 100 bases:
>100_bases AGATGACGACCAGTGCGCAGTCGTCAAACATGGCACGCGATTTAAGGCATCCCCCTTCGCCACACCCTCGTATAGTCACG TGAACCGGCACGTGTATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MIGRNRVQVVTEAITLQYANGKSMARPIGGKRFTPYIGFHIEVGRDDELDARLGIAGIPQIEIKHQRQGGAEIVRHWALG ETILFYPVTSGPVAQTVAGSLGRNAAATAAAGIGLRWGINDRSRMAVRGYLDLLVRVEMARLVQLSVRSRMSDVLLNVLL DHGRVCEAADHLIDRSSHPDLVTFHELALPLGPGEEEEWGKGETTTVVPFKSLHPAQIDRDYIQRIWRPESVHQAALRDW AGIQAWASEYALQNDERVTGERNDVVETSHEIGR
Sequences:
>Translated_274_residues MIGRNRVQVVTEAITLQYANGKSMARPIGGKRFTPYIGFHIEVGRDDELDARLGIAGIPQIEIKHQRQGGAEIVRHWALG ETILFYPVTSGPVAQTVAGSLGRNAAATAAAGIGLRWGINDRSRMAVRGYLDLLVRVEMARLVQLSVRSRMSDVLLNVLL DHGRVCEAADHLIDRSSHPDLVTFHELALPLGPGEEEEWGKGETTTVVPFKSLHPAQIDRDYIQRIWRPESVHQAALRDW AGIQAWASEYALQNDERVTGERNDVVETSHEIGR >Mature_274_residues MIGRNRVQVVTEAITLQYANGKSMARPIGGKRFTPYIGFHIEVGRDDELDARLGIAGIPQIEIKHQRQGGAEIVRHWALG ETILFYPVTSGPVAQTVAGSLGRNAAATAAAGIGLRWGINDRSRMAVRGYLDLLVRVEMARLVQLSVRSRMSDVLLNVLL DHGRVCEAADHLIDRSSHPDLVTFHELALPLGPGEEEEWGKGETTTVVPFKSLHPAQIDRDYIQRIWRPESVHQAALRDW AGIQAWASEYALQNDERVTGERNDVVETSHEIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30391; Mature: 30391
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRNRVQVVTEAITLQYANGKSMARPIGGKRFTPYIGFHIEVGRDDELDARLGIAGIPQ CCCCHHHHHHHHHHEEEECCCCCHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC IEIKHQRQGGAEIVRHWALGETILFYPVTSGPVAQTVAGSLGRNAAATAAAGIGLRWGIN EEEECCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCEEECCC DRSRMAVRGYLDLLVRVEMARLVQLSVRSRMSDVLLNVLLDHGRVCEAADHLIDRSSHPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC LVTFHELALPLGPGEEEEWGKGETTTVVPFKSLHPAQIDRDYIQRIWRPESVHQAALRDW EEEHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHHCCCCHHHHHHHHHH AGIQAWASEYALQNDERVTGERNDVVETSHEIGR HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MIGRNRVQVVTEAITLQYANGKSMARPIGGKRFTPYIGFHIEVGRDDELDARLGIAGIPQ CCCCHHHHHHHHHHEEEECCCCCHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC IEIKHQRQGGAEIVRHWALGETILFYPVTSGPVAQTVAGSLGRNAAATAAAGIGLRWGIN EEEECCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCEEECCC DRSRMAVRGYLDLLVRVEMARLVQLSVRSRMSDVLLNVLLDHGRVCEAADHLIDRSSHPD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC LVTFHELALPLGPGEEEEWGKGETTTVVPFKSLHPAQIDRDYIQRIWRPESVHQAALRDW EEEHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHHCCCCHHHHHHHHHH AGIQAWASEYALQNDERVTGERNDVVETSHEIGR HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA