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The map label for this gene is troD [H]

Identifier: 222523501

GI number: 222523501

Start: 247180

End: 248283

Strand: Reverse

Name: troD [H]

Synonym: Chy400_0207

Alternate gene names: 222523501

Gene position: 248283-247180 (Counterclockwise)

Preceding gene: 222523502

Following gene: 222523500

Centisome position: 4.71

GC content: 57.79

Gene sequence:

>1104_bases
ATGAGTCCTCAACTTGAAGTGCAATTAATTGCGGTGATCATTGCGGCTGCCTGCACGCTTCCCGGTGTCTTTCTGGTCTT
ACGCCGGATGGCGATGCTCAGCGATGCCATCAGCCATACCGTGTTGCTCGGCATCGTGCTGGCGTATCTGATCAGCGGCA
ATCTCTCCTCGCCGCTCCTGTTTGCCGGCGCTGTTGCGATGGGCGTACTGACAGTATGGCTGGTGGAGCTGATGAGTGGC
AGTCGGCTGATGCACGAAGATGCGGCGATTGGTCTGGTCTTTCCGGCGCTATTCAGTCTGGCGGTTCTACTCATCTCACG
CTTTGCCGGCAATGTTCATCTCGATACCGATAGCGTCTTGCTCGGTGAACTGGCATTTGCGCCCTTCGACCGGATCGAAC
TCTTCGGATTAAGCCTGCCTCGTGCGCTGGTGGTAGGTAGTGGGACGCTAATGCTCAATCTTATCCTGCTTGTGCTCTTT
TACAAAGAGCTAAAACTGGCAACGTTCGATCCGGCGCTGGCGACCACGCTCGGTTTCGCGCCGGCTCTGATTCATTATGG
GCTGATGACGAGTGTCTCGCTGACCGCAGTGACCGCATTTGATGCGGTTGGTTCAATCCTGGTGATTGCATTGATGGTGG
CGCCGCCGGCTACGGCATATCTGCTCACCGACCGTCTGCCGCGGATGATCCTGCTCAGTGTAGCGATTGGGATTGCATCT
GCACTCAGTGGTTACTGGCTGGCCCGCTGGTTCGATGTCTCGATTGCCGGCACCATGGCGACCATGACCGGTATCGCCTT
TCTGCTGGCGTTCCTGTTTGCGCCACGGCGGGGAATTGTGGCCCAACGTCGCCAACAGCAGATCAACCGGGAACGGTTTG
CACTTCAGATGTTGACGCTCCATCTGCTCAATCACGAAGGAACCCGGGATGCCAATGTTGAGTGCCATCCGCGCCATCTG
ATCGAAGAGCTGCACTGGCCGGCGGCCTTCGCCGGCGCGATTGTACGGCAGGCCGAGCAACATGGGCTGGTACAGCGCCG
CGGGGATATGCTGGTCTTGACTGAACAGGGTCGGTTGTTTGCCGCTGAAGCGAGTGTCAGGTAG

Upstream 100 bases:

>100_bases
GTTCACCATGATCTCGCTGCTGCTGGCTCCTGAGCGTGGCCTGATCTGGCGTCACATACGGCGCCAGCGAGTGATCGCCT
TTGATTGAACGAGGTAGCGC

Downstream 100 bases:

>100_bases
TGGTGTATTGCTGGTACCTGCTATCCGACCATCACCCTGACACCGCACCTGAGCGATGTCCCATCGCGGGCCAGTGTGCT
GTGCTGGCCCCCAGGAGTGT

Product: ABC-3 protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSPQLEVQLIAVIIAAACTLPGVFLVLRRMAMLSDAISHTVLLGIVLAYLISGNLSSPLLFAGAVAMGVLTVWLVELMSG
SRLMHEDAAIGLVFPALFSLAVLLISRFAGNVHLDTDSVLLGELAFAPFDRIELFGLSLPRALVVGSGTLMLNLILLVLF
YKELKLATFDPALATTLGFAPALIHYGLMTSVSLTAVTAFDAVGSILVIALMVAPPATAYLLTDRLPRMILLSVAIGIAS
ALSGYWLARWFDVSIAGTMATMTGIAFLLAFLFAPRRGIVAQRRQQQINRERFALQMLTLHLLNHEGTRDANVECHPRHL
IEELHWPAAFAGAIVRQAEQHGLVQRRGDMLVLTEQGRLFAAEASVR

Sequences:

>Translated_367_residues
MSPQLEVQLIAVIIAAACTLPGVFLVLRRMAMLSDAISHTVLLGIVLAYLISGNLSSPLLFAGAVAMGVLTVWLVELMSG
SRLMHEDAAIGLVFPALFSLAVLLISRFAGNVHLDTDSVLLGELAFAPFDRIELFGLSLPRALVVGSGTLMLNLILLVLF
YKELKLATFDPALATTLGFAPALIHYGLMTSVSLTAVTAFDAVGSILVIALMVAPPATAYLLTDRLPRMILLSVAIGIAS
ALSGYWLARWFDVSIAGTMATMTGIAFLLAFLFAPRRGIVAQRRQQQINRERFALQMLTLHLLNHEGTRDANVECHPRHL
IEELHWPAAFAGAIVRQAEQHGLVQRRGDMLVLTEQGRLFAAEASVR
>Mature_366_residues
SPQLEVQLIAVIIAAACTLPGVFLVLRRMAMLSDAISHTVLLGIVLAYLISGNLSSPLLFAGAVAMGVLTVWLVELMSGS
RLMHEDAAIGLVFPALFSLAVLLISRFAGNVHLDTDSVLLGELAFAPFDRIELFGLSLPRALVVGSGTLMLNLILLVLFY
KELKLATFDPALATTLGFAPALIHYGLMTSVSLTAVTAFDAVGSILVIALMVAPPATAYLLTDRLPRMILLSVAIGIASA
LSGYWLARWFDVSIAGTMATMTGIAFLLAFLFAPRRGIVAQRRQQQINRERFALQMLTLHLLNHEGTRDANVECHPRHLI
EELHWPAAFAGAIVRQAEQHGLVQRRGDMLVLTEQGRLFAAEASVR

Specific function: Part of an ATP-driven transport system troABCD for zinc [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 39672; Mature: 39541

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQLEVQLIAVIIAAACTLPGVFLVLRRMAMLSDAISHTVLLGIVLAYLISGNLSSPLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FAGAVAMGVLTVWLVELMSGSRLMHEDAAIGLVFPALFSLAVLLISRFAGNVHLDTDSVL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHH
LGELAFAPFDRIELFGLSLPRALVVGSGTLMLNLILLVLFYKELKLATFDPALATTLGFA
HHHHHHCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PALIHYGLMTSVSLTAVTAFDAVGSILVIALMVAPPATAYLLTDRLPRMILLSVAIGIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALSGYWLARWFDVSIAGTMATMTGIAFLLAFLFAPRRGIVAQRRQQQINRERFALQMLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
HLLNHEGTRDANVECHPRHLIEELHWPAAFAGAIVRQAEQHGLVQRRGDMLVLTEQGRLF
HHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCEE
AAEASVR
ECCCCCC
>Mature Secondary Structure 
SPQLEVQLIAVIIAAACTLPGVFLVLRRMAMLSDAISHTVLLGIVLAYLISGNLSSPLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FAGAVAMGVLTVWLVELMSGSRLMHEDAAIGLVFPALFSLAVLLISRFAGNVHLDTDSVL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHH
LGELAFAPFDRIELFGLSLPRALVVGSGTLMLNLILLVLFYKELKLATFDPALATTLGFA
HHHHHHCCHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PALIHYGLMTSVSLTAVTAFDAVGSILVIALMVAPPATAYLLTDRLPRMILLSVAIGIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALSGYWLARWFDVSIAGTMATMTGIAFLLAFLFAPRRGIVAQRRQQQINRERFALQMLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
HLLNHEGTRDANVECHPRHLIEELHWPAAFAGAIVRQAEQHGLVQRRGDMLVLTEQGRLF
HHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCEE
AAEASVR
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9332349; 9665876 [H]