| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pncB [H]
Identifier: 222523499
GI number: 222523499
Start: 244890
End: 246434
Strand: Reverse
Name: pncB [H]
Synonym: Chy400_0205
Alternate gene names: 222523499
Gene position: 246434-244890 (Counterclockwise)
Preceding gene: 222523500
Following gene: 222523497
Centisome position: 4.68
GC content: 57.41
Gene sequence:
>1545_bases ATGAACAACGTCCAACAGCGTACTGCTACCGGCATCCTCTTCACCGATCAGTATCAATTGACAATGGCCCAACTCTATTT TCGGATGGGCATTCACGAACGCATGGCGCAATTCGATCATTTCTTCCGCCAGCCACCCAACTACGGCTTGCACGCTGCCG GGTACTGCATTGCTGCCGGTCTGGAATGGCTCCTCGACTGGATGGAGACGGCATGCTTTGGCCCTGCCGAGCTTGAAGTG TTGCGCAACCAGCGGAATCGGGTCGGTAACCCGATCTTCGCCGAAGATTTTCTGACCTACCTGAGTCGGCATGGTCATTT CGGTGGGATGACGCTGTGGGCCGTCCCAGAGGGTCGAGTAGTTCATGCCCAGGCGCCGATGACGATTGTGCGTGGGCCGT TGCTCATGGCGCAGATTTTGGAAACAGCGCTGCTCAATCATCTCAATTACCAGACACTGGTTGCTACCAAAGCCAGCCGT ATTCGCGAGGCGAGTGGTGCCAGCACGGTGCTGGAATTCGGCCTGCGTCGCGGCCAGGGGATGGGAGCCAATGCCGGCAC CCGTGCCGCGCTGATCGGTGGCGCCGATTTTACCTCGAATGTCGGTCTGGCCCATACTGTCGGGCAGACCGCCAAAGGGA CACATGCCCACGCCATGGTGCAGGCATTTCTGGCCCTCGGCATGAGTGAACTTGACGCCTTCCGTGCTTACGCCGAGGTC TATCCCGACGATTGTCTGTTACTGGTCGATACGATTGACACGCTGAACAGCGGTCTGCCCAATGCGATTCGCGTCTTTGA AGAGTTGCGGGCGAAAGGCCACAAACCAGTTGGTGTGCGTCTTGATTCGGGTGATCTGGCGTATCTGGCAATTCAAACGG CCTTGATGCTTGATCGGTCCGGTTTTCCCGATACCGTTATTGTGCTTTCCAATGACCTCGATGAACTGGTGATCTGGCAG ATTCAAAGCCAGATCGTTCAGGAAGCGCCGCGCTACAATGCCGATGCCAATGCTATTATTCGCCGTCTGGTGTACGGTGT TGGTACACGGTTGGTGACCTCACATGGTGAAGGGGCGTTGGGGGGAGTCTACAAGCTGGTAGCGTTGCACGATGGACGCG AATGGCAACCCGCAATTAAGATCGCCGAAAGTGCGGCCAAACTGACCAATCCCGGCCTGAAGCGGGTCTGGCGATTGTAC GATAGTCGGGGCAAGGCCACCGCCGATCTGATTGCACTTGAGGACGAAGACCCGACCCAGGAAGAACTGATTCGGCTACG CCACCCTAGCGATCATGCCCGTCAGCGGGTGGTCGTCCGTGCCGAACTGACCGGGATTGAGCCGTTGCTTGAGCCGGCAA TGCTGGCAGGCCGGCGTCTGATCGAGCCACAACCAATCGAGCAGATGCGGGCGCGGCGGTACGCCGATGTTGAGCGGCTC GATCTTGGGGTGCGACGCATCATGAATCCGCACATCTATCACGTCTCGCTCAGTCAACGGCTGTGGGATATGAAACAAGA GTTGCTCAACCGCTTTCAAATGTAG
Upstream 100 bases:
>100_bases ATAGGTTCTAGCACGCTCACCCGCTATCCTCACAACTATTGACAGCACTGCCCTGCGCTGGTATATTAGTGTATAATTTA CACTATACAGTGAGGCTTGT
Downstream 100 bases:
>100_bases CACCGGTTGTGAGCATTGACGTGAAGGTGATGCACAGATACTCATCGTGTGGAAGCATGGCGTTCGTCCTGTTATCCAAT CAGAGCGTATACCCTTTACC
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MNNVQQRTATGILFTDQYQLTMAQLYFRMGIHERMAQFDHFFRQPPNYGLHAAGYCIAAGLEWLLDWMETACFGPAELEV LRNQRNRVGNPIFAEDFLTYLSRHGHFGGMTLWAVPEGRVVHAQAPMTIVRGPLLMAQILETALLNHLNYQTLVATKASR IREASGASTVLEFGLRRGQGMGANAGTRAALIGGADFTSNVGLAHTVGQTAKGTHAHAMVQAFLALGMSELDAFRAYAEV YPDDCLLLVDTIDTLNSGLPNAIRVFEELRAKGHKPVGVRLDSGDLAYLAIQTALMLDRSGFPDTVIVLSNDLDELVIWQ IQSQIVQEAPRYNADANAIIRRLVYGVGTRLVTSHGEGALGGVYKLVALHDGREWQPAIKIAESAAKLTNPGLKRVWRLY DSRGKATADLIALEDEDPTQEELIRLRHPSDHARQRVVVRAELTGIEPLLEPAMLAGRRLIEPQPIEQMRARRYADVERL DLGVRRIMNPHIYHVSLSQRLWDMKQELLNRFQM
Sequences:
>Translated_514_residues MNNVQQRTATGILFTDQYQLTMAQLYFRMGIHERMAQFDHFFRQPPNYGLHAAGYCIAAGLEWLLDWMETACFGPAELEV LRNQRNRVGNPIFAEDFLTYLSRHGHFGGMTLWAVPEGRVVHAQAPMTIVRGPLLMAQILETALLNHLNYQTLVATKASR IREASGASTVLEFGLRRGQGMGANAGTRAALIGGADFTSNVGLAHTVGQTAKGTHAHAMVQAFLALGMSELDAFRAYAEV YPDDCLLLVDTIDTLNSGLPNAIRVFEELRAKGHKPVGVRLDSGDLAYLAIQTALMLDRSGFPDTVIVLSNDLDELVIWQ IQSQIVQEAPRYNADANAIIRRLVYGVGTRLVTSHGEGALGGVYKLVALHDGREWQPAIKIAESAAKLTNPGLKRVWRLY DSRGKATADLIALEDEDPTQEELIRLRHPSDHARQRVVVRAELTGIEPLLEPAMLAGRRLIEPQPIEQMRARRYADVERL DLGVRRIMNPHIYHVSLSQRLWDMKQELLNRFQM >Mature_514_residues MNNVQQRTATGILFTDQYQLTMAQLYFRMGIHERMAQFDHFFRQPPNYGLHAAGYCIAAGLEWLLDWMETACFGPAELEV LRNQRNRVGNPIFAEDFLTYLSRHGHFGGMTLWAVPEGRVVHAQAPMTIVRGPLLMAQILETALLNHLNYQTLVATKASR IREASGASTVLEFGLRRGQGMGANAGTRAALIGGADFTSNVGLAHTVGQTAKGTHAHAMVQAFLALGMSELDAFRAYAEV YPDDCLLLVDTIDTLNSGLPNAIRVFEELRAKGHKPVGVRLDSGDLAYLAIQTALMLDRSGFPDTVIVLSNDLDELVIWQ IQSQIVQEAPRYNADANAIIRRLVYGVGTRLVTSHGEGALGGVYKLVALHDGREWQPAIKIAESAAKLTNPGLKRVWRLY DSRGKATADLIALEDEDPTQEELIRLRHPSDHARQRVVVRAELTGIEPLLEPAMLAGRRLIEPQPIEQMRARRYADVERL DLGVRRIMNPHIYHVSLSQRLWDMKQELLNRFQM
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=559, Percent_Identity=32.2003577817531, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71997952, Length=552, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71997947, Length=552, Percent_Identity=33.3333333333333, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI71997955, Length=213, Percent_Identity=39.4366197183099, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24581587, Length=549, Percent_Identity=30.7832422586521, Blast_Score=214, Evalue=9e-56, Organism=Drosophila melanogaster, GI161076680, Length=286, Percent_Identity=32.1678321678322, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24581595, Length=286, Percent_Identity=32.1678321678322, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI28574709, Length=286, Percent_Identity=32.1678321678322, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24581593, Length=286, Percent_Identity=32.1678321678322, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24581591, Length=286, Percent_Identity=32.1678321678322, Blast_Score=115, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 57356; Mature: 57356
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVQQRTATGILFTDQYQLTMAQLYFRMGIHERMAQFDHFFRQPPNYGLHAAGYCIAAG CCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LEWLLDWMETACFGPAELEVLRNQRNRVGNPIFAEDFLTYLSRHGHFGGMTLWAVPEGRV HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCE VHAQAPMTIVRGPLLMAQILETALLNHLNYQTLVATKASRIREASGASTVLEFGLRRGQG EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC MGANAGTRAALIGGADFTSNVGLAHTVGQTAKGTHAHAMVQAFLALGMSELDAFRAYAEV CCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH YPDDCLLLVDTIDTLNSGLPNAIRVFEELRAKGHKPVGVRLDSGDLAYLAIQTALMLDRS CCCCEEEEEECHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHCC GFPDTVIVLSNDLDELVIWQIQSQIVQEAPRYNADANAIIRRLVYGVGTRLVTSHGEGAL CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHEEECCCCCCH GGVYKLVALHDGREWQPAIKIAESAAKLTNPGLKRVWRLYDSRGKATADLIALEDEDPTQ HHHEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCH EELIRLRHPSDHARQRVVVRAELTGIEPLLEPAMLAGRRLIEPQPIEQMRARRYADVERL HHHHHHCCCCHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH DLGVRRIMNPHIYHVSLSQRLWDMKQELLNRFQM HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNVQQRTATGILFTDQYQLTMAQLYFRMGIHERMAQFDHFFRQPPNYGLHAAGYCIAAG CCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LEWLLDWMETACFGPAELEVLRNQRNRVGNPIFAEDFLTYLSRHGHFGGMTLWAVPEGRV HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCE VHAQAPMTIVRGPLLMAQILETALLNHLNYQTLVATKASRIREASGASTVLEFGLRRGQG EEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC MGANAGTRAALIGGADFTSNVGLAHTVGQTAKGTHAHAMVQAFLALGMSELDAFRAYAEV CCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH YPDDCLLLVDTIDTLNSGLPNAIRVFEELRAKGHKPVGVRLDSGDLAYLAIQTALMLDRS CCCCEEEEEECHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEHHHHHHHHHHHCC GFPDTVIVLSNDLDELVIWQIQSQIVQEAPRYNADANAIIRRLVYGVGTRLVTSHGEGAL CCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHEEECCCCCCH GGVYKLVALHDGREWQPAIKIAESAAKLTNPGLKRVWRLYDSRGKATADLIALEDEDPTQ HHHEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCH EELIRLRHPSDHARQRVVVRAELTGIEPLLEPAMLAGRRLIEPQPIEQMRARRYADVERL HHHHHHCCCCHHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH DLGVRRIMNPHIYHVSLSQRLWDMKQELLNRFQM HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]