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The map label for this gene is frc [H]

Identifier: 222523484

GI number: 222523484

Start: 223001

End: 224218

Strand: Reverse

Name: frc [H]

Synonym: Chy400_0190

Alternate gene names: 222523484

Gene position: 224218-223001 (Counterclockwise)

Preceding gene: 222523485

Following gene: 222523483

Centisome position: 4.26

GC content: 60.76

Gene sequence:

>1218_bases
ATGGATGGAACGACCACAACGTTGCCGCTGGCCGGAATTCGCGTTATCGATGCCGCGACGGTGATTGCTGCGCCTTTTTG
TGCGACCCTGTTGGGCGAATTCGGCGCTGACGTGTTGAAAGTAGAACATCCTATCGGCGGTGATGCGCTGCGCCGCTTCG
GGACGCCGACCGCACGCGGCGATACGCTGACCTGGCTGAGCGAGTCGCGCAACAAGCGTTCGGTTACGCTCAACCTGCAA
CATCCCGAAGGGGCGCGTGTCTTCAAAGAGCTGATCGCCCACTCCGATGTGCTGTGCGAAAATTTTCGCCCCGGTACGCT
GGAAAAATGGGGGCTGGGTTGGGATGTGTTGAGCAAGATCAACCCGCGCCTGATTATGTTGCGGGTCACCGGCTATGGGC
AGACCGGGCCGTACCGTGATCGACCGGGGTTTGCCCGGATTGCGCACGCCGTCGGTGGCATCGCGTATCTGGCCGGTATG
CCGAAAGGGACACCGGTGACGCCGGGGTCAACGACACTCGCCGATTACATGACCGGTCTCTACGGCTGTATTGGCGTGCT
GCTGGCGCTGCGCCACCGCGAACAGACCGGACGCGGCCAGTACATTGATGCCGCTCTGTACGAATCGGTCTTCCGCTGTA
GCGATGAGCTGGTGCCGGCCTACGGGATGTATCGCAAGGTGCGTGAACGCCACGGTTCCCACTACAACGAGTTTGCCTGT
CCTCACGGCCACTTCCAGACCAAAGACGGGAAATGGGTGGCGATCTCGTGTGCGACCGATAAGCTGTTTGCCCGACTGGC
AAATGCGATGGGGCGCCCCGAACTGGCGTCGTCGAGTGTCTACGGCGACCAGAAAGTACGGCTGGCGCACGCCAGTGATG
TGAACGAGATTGTGCGTGACTGGTGTAGCTCGCTGACCCGCGCCGAAGTGCTTGAGCGCTGTTACGCCACGGCTACCCCG
GCGGCACCGCTGAACGACATTGCCGACTTCTTCGGTGATCGCCACGTCCACGCTCGTCGGAATCTGGTCGCGATTGATGC
CGAAGACCTGGGGGAGACGTTGATCATGCCGAATGTGGTGCCAAAGCTCTCGGAGACACCGGGCAGCATTCGCTCGCTCG
GCCCGAAACTCGGCGAGCATACGGAAGAGGTCTTGAAAGAGATTCTCGGCATGTGCGACGAGCAGATCAACGATCTGCGT
TCAAAGCGGGTGATATAG

Upstream 100 bases:

>100_bases
GTCGTGCTGTTCATCCTGAAGGTCAGCTTCCGTGTCCTGCTCACAGCACAGATGGCAACCTGGGTTATGCTGTAACAATA
CCACTTACGAGGTGAAGGCA

Downstream 100 bases:

>100_bases
GTTCTGGCTATGGGAGCGAGGGCGTGGCACCGATGCACGGCGATGCGCTCTACACGTCCTCGGCTAATGGTGGCCTGTAT
CGGCAAGAGTAATGGCACCG

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQ
HPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGM
PKGTPVTPGSTTLADYMTGLYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGSHYNEFAC
PHGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIVRDWCSSLTRAEVLERCYATATP
AAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVVPKLSETPGSIRSLGPKLGEHTEEVLKEILGMCDEQINDLR
SKRVI

Sequences:

>Translated_405_residues
MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQ
HPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGM
PKGTPVTPGSTTLADYMTGLYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGSHYNEFAC
PHGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIVRDWCSSLTRAEVLERCYATATP
AAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVVPKLSETPGSIRSLGPKLGEHTEEVLKEILGMCDEQINDLR
SKRVI
>Mature_405_residues
MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARGDTLTWLSESRNKRSVTLNLQ
HPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKINPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGM
PKGTPVTPGSTTLADYMTGLYGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGSHYNEFAC
PHGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIVRDWCSSLTRAEVLERCYATATP
AAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVVPKLSETPGSIRSLGPKLGEHTEEVLKEILGMCDEQINDLR
SKRVI

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=397, Percent_Identity=31.4861460957179, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI300863124, Length=422, Percent_Identity=30.8056872037915, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI300863126, Length=397, Percent_Identity=27.7078085642317, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI13376042, Length=422, Percent_Identity=27.0142180094787, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI266456254, Length=406, Percent_Identity=29.5566502463054, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI42794625, Length=406, Percent_Identity=29.5566502463054, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI266458393, Length=265, Percent_Identity=31.6981132075472, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI266458397, Length=260, Percent_Identity=31.9230769230769, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI266458395, Length=131, Percent_Identity=38.9312977099237, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI42822893, Length=131, Percent_Identity=38.9312977099237, Blast_Score=96, Evalue=8e-20,
Organism=Escherichia coli, GI87082093, Length=343, Percent_Identity=33.5276967930029, Blast_Score=194, Evalue=8e-51,
Organism=Escherichia coli, GI1788717, Length=424, Percent_Identity=28.0660377358491, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1786222, Length=404, Percent_Identity=27.7227722772277, Blast_Score=124, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32564160, Length=274, Percent_Identity=29.1970802919708, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115535051, Length=353, Percent_Identity=26.3456090651558, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648431, Length=399, Percent_Identity=33.3333333333333, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24585488, Length=406, Percent_Identity=27.5862068965517, Blast_Score=137, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 44384; Mature: 44384

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCCCC
DTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKI
CEEHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHCC
NPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGMPKGTPVTPGSTTLADYMTGL
CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
YGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGSHYNEFAC
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PHGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIVRD
CCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHH
WCSSLTRAEVLERCYATATPAAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHCCEEEECHHHHCCCHHCCCCC
PKLSETPGSIRSLGPKLGEHTEEVLKEILGMCDEQINDLRSKRVI
CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDGTTTTLPLAGIRVIDAATVIAAPFCATLLGEFGADVLKVEHPIGGDALRRFGTPTARG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCCCC
DTLTWLSESRNKRSVTLNLQHPEGARVFKELIAHSDVLCENFRPGTLEKWGLGWDVLSKI
CEEHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHCC
NPRLIMLRVTGYGQTGPYRDRPGFARIAHAVGGIAYLAGMPKGTPVTPGSTTLADYMTGL
CCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
YGCIGVLLALRHREQTGRGQYIDAALYESVFRCSDELVPAYGMYRKVRERHGSHYNEFAC
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCC
PHGHFQTKDGKWVAISCATDKLFARLANAMGRPELASSSVYGDQKVRLAHASDVNEIVRD
CCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHCCHHHHHHH
WCSSLTRAEVLERCYATATPAAPLNDIADFFGDRHVHARRNLVAIDAEDLGETLIMPNVV
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHCCEEEECHHHHCCCHHCCCCC
PKLSETPGSIRSLGPKLGEHTEEVLKEILGMCDEQINDLRSKRVI
CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA