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The map label for this gene is frc [H]

Identifier: 222523482

GI number: 222523482

Start: 220626

End: 221855

Strand: Reverse

Name: frc [H]

Synonym: Chy400_0188

Alternate gene names: 222523482

Gene position: 221855-220626 (Counterclockwise)

Preceding gene: 222523483

Following gene: 222523481

Centisome position: 4.21

GC content: 61.71

Gene sequence:

>1230_bases
ATGAAGGGTATTCTCCACGGATTGCGTGTAGTGGAGGGATCGGCCTTTGTTGCCGCACCGCTGGGGGGCATGACGCTCGC
GCAGTTGGGGGCCGATGTGATTCGCTTCGACCCTATCGGCGGCGGTCTCGATTATAAACGCTGGCCGGTTACGCTCGACG
GTAAGCATAGTCTGTTTTGGGCCGGTCTCAACAAGGGCAAACGTTCGATTGCGATTGATATTCGCCATCCACGCGGGCAG
GAGTTGCTGACGCAGCTTATCTGCGCACCCGGCGAGCATGCCGGTCTCTTTATTACCAATTTTCCGGCGCGCGGTTGGTT
GAGTTACGATGAGCTGAAGCGTCACCGCGCCGACCTGATTATGGTCAATCTGGTCGGGCGGCGCGATGGCGGGTCAGAGG
TGGATTACACCGTTAACCCGCAGTTGGGGCTGCCGTTTATGACCGGCCCGGTCACGACGCCTGATGTGGTTAATCACGTG
CTGCCGGCCTGGGATATTGTGACCGGGCAGATGATTGCGCTCGGTCTGCTGGCTGCCGAGCGTCACCGTCGGCTGACCGG
TGAGGGGCAACTGGTGAAGATTGCGCTGAAGGATGTCGGGCTGGCGATGATCGGCCATCTGGGGATGATTGCCGAGGTGA
TGATCAACGATACCGACCGTCCACGGCAGGGGAATTATCTCTACGGGGCGTTCGGGCGCGATTTCGAGACCCTCGATGGG
AAGCGGGTGATGGTGGTTGGTTTGACCGATTTGCAGTGGAAGGCGCTGGGCAAGGCGACCGGTCTGACGGATGCGTTCAA
TGCGCTCGGTGCGCGGCTGGGGCTGAATATGGACGAGGAAGGCGACCGCTTCCGTGCCCGCCACGAGATCGCTGCGCTGC
TTGAACCCTGGTTCCACGCCCGCACGCTGGCCGAGGTACGACGCATCTTTGAACAGCACCGCGTCACCTGGGCGCCGTAC
CGCACGGTACGGGAAGCGATTGCCCAGGACCCCGACTGCTCCACCGATAACCCGATGTTTGCGATGGTCGAGCAGCCCGG
CATTGGGAGCTACCTGATGCCGGGTTCGCCGCTGGATTTCACTGCCGTCCCGCGTCTGCCTGTCCAGCCTGCGCCCCGGC
TCGGCGAGCACACCGATGAGATTTTGCTGGAGGTGCTGGGCTTGAGTGAAGCTGAAGTCGGTCGCTTGCACGATGAAGGG
ATTGTGGCCGGGCCAGATCGGGCAGCGTAG

Upstream 100 bases:

>100_bases
TTCGTCACGTTCGAGATGACGTCTTCCCATCCAACAGGCTATACCATCGCATACTTGCGGAGGCAGTGAGTGGTATCCGC
ATTGATTTGAGAGGAGCACC

Downstream 100 bases:

>100_bases
CCGTATGCACTGCCGCCGAATGATGAGATTGAAACACGGAGGGAGAAGATCATGCGCAAGCTAGCTCACAACTTCTACAA
ACCGTTGGCCATCGGTGCTC

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MKGILHGLRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGKHSLFWAGLNKGKRSIAIDIRHPRGQ
ELLTQLICAPGEHAGLFITNFPARGWLSYDELKRHRADLIMVNLVGRRDGGSEVDYTVNPQLGLPFMTGPVTTPDVVNHV
LPAWDIVTGQMIALGLLAAERHRRLTGEGQLVKIALKDVGLAMIGHLGMIAEVMINDTDRPRQGNYLYGAFGRDFETLDG
KRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLNMDEEGDRFRARHEIAALLEPWFHARTLAEVRRIFEQHRVTWAPY
RTVREAIAQDPDCSTDNPMFAMVEQPGIGSYLMPGSPLDFTAVPRLPVQPAPRLGEHTDEILLEVLGLSEAEVGRLHDEG
IVAGPDRAA

Sequences:

>Translated_409_residues
MKGILHGLRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGKHSLFWAGLNKGKRSIAIDIRHPRGQ
ELLTQLICAPGEHAGLFITNFPARGWLSYDELKRHRADLIMVNLVGRRDGGSEVDYTVNPQLGLPFMTGPVTTPDVVNHV
LPAWDIVTGQMIALGLLAAERHRRLTGEGQLVKIALKDVGLAMIGHLGMIAEVMINDTDRPRQGNYLYGAFGRDFETLDG
KRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLNMDEEGDRFRARHEIAALLEPWFHARTLAEVRRIFEQHRVTWAPY
RTVREAIAQDPDCSTDNPMFAMVEQPGIGSYLMPGSPLDFTAVPRLPVQPAPRLGEHTDEILLEVLGLSEAEVGRLHDEG
IVAGPDRAA
>Mature_409_residues
MKGILHGLRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGKHSLFWAGLNKGKRSIAIDIRHPRGQ
ELLTQLICAPGEHAGLFITNFPARGWLSYDELKRHRADLIMVNLVGRRDGGSEVDYTVNPQLGLPFMTGPVTTPDVVNHV
LPAWDIVTGQMIALGLLAAERHRRLTGEGQLVKIALKDVGLAMIGHLGMIAEVMINDTDRPRQGNYLYGAFGRDFETLDG
KRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLNMDEEGDRFRARHEIAALLEPWFHARTLAEVRRIFEQHRVTWAPY
RTVREAIAQDPDCSTDNPMFAMVEQPGIGSYLMPGSPLDFTAVPRLPVQPAPRLGEHTDEILLEVLGLSEAEVGRLHDEG
IVAGPDRAA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=414, Percent_Identity=24.3961352657005, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI300863124, Length=438, Percent_Identity=22.8310502283105, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI13376042, Length=426, Percent_Identity=22.7699530516432, Blast_Score=92, Evalue=6e-19,
Organism=Escherichia coli, GI87082093, Length=394, Percent_Identity=24.8730964467005, Blast_Score=76, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24648431, Length=413, Percent_Identity=24.9394673123487, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 44813; Mature: 44813

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGILHGLRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGKHSLFW
CCCHHHHHHHCCCCEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCEEEE
AGLNKGKRSIAIDIRHPRGQELLTQLICAPGEHAGLFITNFPARGWLSYDELKRHRADLI
EECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCEE
MVNLVGRRDGGSEVDYTVNPQLGLPFMTGPVTTPDVVNHVLPAWDIVTGQMIALGLLAAE
EEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
RHRRLTGEGQLVKIALKDVGLAMIGHLGMIAEVMINDTDRPRQGNYLYGAFGRDFETLDG
HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHCCC
KRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLNMDEEGDRFRARHEIAALLEPWFHA
CEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTLAEVRRIFEQHRVTWAPYRTVREAIAQDPDCSTDNPMFAMVEQPGIGSYLMPGSPLDF
HHHHHHHHHHHHHCCEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE
TAVPRLPVQPAPRLGEHTDEILLEVLGLSEAEVGRLHDEGIVAGPDRAA
ECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MKGILHGLRVVEGSAFVAAPLGGMTLAQLGADVIRFDPIGGGLDYKRWPVTLDGKHSLFW
CCCHHHHHHHCCCCEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCEEEE
AGLNKGKRSIAIDIRHPRGQELLTQLICAPGEHAGLFITNFPARGWLSYDELKRHRADLI
EECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCEE
MVNLVGRRDGGSEVDYTVNPQLGLPFMTGPVTTPDVVNHVLPAWDIVTGQMIALGLLAAE
EEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH
RHRRLTGEGQLVKIALKDVGLAMIGHLGMIAEVMINDTDRPRQGNYLYGAFGRDFETLDG
HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHCCC
KRVMVVGLTDLQWKALGKATGLTDAFNALGARLGLNMDEEGDRFRARHEIAALLEPWFHA
CEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTLAEVRRIFEQHRVTWAPYRTVREAIAQDPDCSTDNPMFAMVEQPGIGSYLMPGSPLDF
HHHHHHHHHHHHHCCEECHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCE
TAVPRLPVQPAPRLGEHTDEILLEVLGLSEAEVGRLHDEGIVAGPDRAA
ECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA