| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523478
Identifier: 222523478
GI number: 222523478
Start: 215951
End: 217447
Strand: Direct
Name: 222523478
Synonym: Chy400_0184
Alternate gene names: NA
Gene position: 215951-217447 (Clockwise)
Preceding gene: 222523475
Following gene: 222523479
Centisome position: 4.1
GC content: 62.46
Gene sequence:
>1497_bases ATGCACCAGCCTTCACTCATCGGCCCGGCGATCCTGATTGTGCTTCTGATCACGCTGCCCCTGGCTTCCATCGGCGATCT GATCCTGGATCAGATCGGCTGGCAGCCGTTGTGGTTGATCGGTGCCAGTATCATCGCCGGTATGGAAGCGTTTGCCTTGC GGATGCGGATGCTGGCCGGCCTGCACGAAGCGGAAGGTGGCACGTTGCGCTATCTGGCCGCCGAGATTTTTGCGCTGGTT GTGCTGGCCCGGCTGGTAGCGACGCTGGGCTTCGGCGGCGAGGGTATCCGGGCGATGATGAGCTGGATCACTGATCCATT GGCCTTCTTCGATGTTCCATTTCTCATCTGCCTGCTGGCGCTGACTACGGTGGTGATGCTCAGTCGGAGCGGGATCGCTG CCATCGCGGCCATAACACCAAATCCACCCCAAAAAATGCCCCTGTACACTCTCGACGTACTCTTCTACAACAGCGACGCA AAAATTCGCCGCTGGAATGCAGTCAAAGCGATCATCAGCGGCGTAAGCTGGGGCGGGTTGTTGATCATCTGGCTCCAGAG CTGGCGGCCAGGGAATGCAGATGCGTTTTCCGGCTGGATTGCGTTGTATCTGATCGGCGGACTCAGCCTGATCGAGCTTG CCCGCCGGCGGGCGTCCCTGGCCGACTGGCAGAGCGATGGTGCCGAGGTCGCGGTTGATGTGCAACGAAGCTGGCACCTG CTGAGCGTAATGCTCATCGGTCTGATGATCGTGCTGACGCTGGTATTTCCCTTCCCCCGCGAGATGTCCATGCCGGAAGA ATGGCGCCGGGCCATCTACTCACTGGTCGGGCTGGTCATCTTCATCGGCCTCATCGCATCGCTCCTGTTCGTCGGCCTGA TCAGTCTGATCATGCTGCTGCCAATGCTCCTCTACCTGCTGCTCAACTGGCTCCTCACCACAAACTCAACCTCCGCCGCG ATGCCCATCCCGCAGCCGCCGCTCATTCCTCCGGCCACCGCCAGCGAGCCGATGGTATGGCCCGGCCTTATCTTCTGGTT CTGTGTAGCCGTGCTCACCGTGCTGGCGTTCTGGCGGATTGCGCGCCGCCAGACGTGGCTGAAGGCGGCATGGGTGAATG CCGTGACCTGGCTGACGGCCTGGTGGCACCACCTGCGCCACCGGCGTATCGGGGGCTGGCCGCACTGGTGGCATTCGCAA GAGGAGCCGCCTCCCCCACCACACTCACGGCGCAGCCGCAGCGGGCCGGTGGATACGGTGATTGCCTGCTACCATGCTGC GCTCCGTCACGCCACTGCGCGTGGCTACCCCCGCCGGCCACCGCAGACCCCGGCAGAGTATGCGGAACGGATCAGCGGCG AGTTACCCGCAGGTGCCGCCGAATTACAGGCGCTCACCGAGGCGTATCAACGGGTGGTGTATGCCGGCAAGCCCTTCGAC CGCTCCGAACGGCGACAGTTTAGCGCGTTATTGCGTCGCTTTCGGCGTAAAGTGTGA
Upstream 100 bases:
>100_bases GTATAGCACGTCATGATCGAGATGGTATCTGACATGCGAATGATAGTTCTATCAGGTACAATAGAAGTTATCTGACAGGC GACGACTCGGCGGAGGGGCT
Downstream 100 bases:
>100_bases GATAGGAGATAGGAGATAGGAGATAGAAGATAGGAGATAGGGGATAGGGGATAGGAGATAGGGGATAGGGGATAGGGGAT AGGAGATAGAAGGTAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MHQPSLIGPAILIVLLITLPLASIGDLILDQIGWQPLWLIGASIIAGMEAFALRMRMLAGLHEAEGGTLRYLAAEIFALV VLARLVATLGFGGEGIRAMMSWITDPLAFFDVPFLICLLALTTVVMLSRSGIAAIAAITPNPPQKMPLYTLDVLFYNSDA KIRRWNAVKAIISGVSWGGLLIIWLQSWRPGNADAFSGWIALYLIGGLSLIELARRRASLADWQSDGAEVAVDVQRSWHL LSVMLIGLMIVLTLVFPFPREMSMPEEWRRAIYSLVGLVIFIGLIASLLFVGLISLIMLLPMLLYLLLNWLLTTNSTSAA MPIPQPPLIPPATASEPMVWPGLIFWFCVAVLTVLAFWRIARRQTWLKAAWVNAVTWLTAWWHHLRHRRIGGWPHWWHSQ EEPPPPPHSRRSRSGPVDTVIACYHAALRHATARGYPRRPPQTPAEYAERISGELPAGAAELQALTEAYQRVVYAGKPFD RSERRQFSALLRRFRRKV
Sequences:
>Translated_498_residues MHQPSLIGPAILIVLLITLPLASIGDLILDQIGWQPLWLIGASIIAGMEAFALRMRMLAGLHEAEGGTLRYLAAEIFALV VLARLVATLGFGGEGIRAMMSWITDPLAFFDVPFLICLLALTTVVMLSRSGIAAIAAITPNPPQKMPLYTLDVLFYNSDA KIRRWNAVKAIISGVSWGGLLIIWLQSWRPGNADAFSGWIALYLIGGLSLIELARRRASLADWQSDGAEVAVDVQRSWHL LSVMLIGLMIVLTLVFPFPREMSMPEEWRRAIYSLVGLVIFIGLIASLLFVGLISLIMLLPMLLYLLLNWLLTTNSTSAA MPIPQPPLIPPATASEPMVWPGLIFWFCVAVLTVLAFWRIARRQTWLKAAWVNAVTWLTAWWHHLRHRRIGGWPHWWHSQ EEPPPPPHSRRSRSGPVDTVIACYHAALRHATARGYPRRPPQTPAEYAERISGELPAGAAELQALTEAYQRVVYAGKPFD RSERRQFSALLRRFRRKV >Mature_498_residues MHQPSLIGPAILIVLLITLPLASIGDLILDQIGWQPLWLIGASIIAGMEAFALRMRMLAGLHEAEGGTLRYLAAEIFALV VLARLVATLGFGGEGIRAMMSWITDPLAFFDVPFLICLLALTTVVMLSRSGIAAIAAITPNPPQKMPLYTLDVLFYNSDA KIRRWNAVKAIISGVSWGGLLIIWLQSWRPGNADAFSGWIALYLIGGLSLIELARRRASLADWQSDGAEVAVDVQRSWHL LSVMLIGLMIVLTLVFPFPREMSMPEEWRRAIYSLVGLVIFIGLIASLLFVGLISLIMLLPMLLYLLLNWLLTTNSTSAA MPIPQPPLIPPATASEPMVWPGLIFWFCVAVLTVLAFWRIARRQTWLKAAWVNAVTWLTAWWHHLRHRRIGGWPHWWHSQ EEPPPPPHSRRSRSGPVDTVIACYHAALRHATARGYPRRPPQTPAEYAERISGELPAGAAELQALTEAYQRVVYAGKPFD RSERRQFSALLRRFRRKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55679; Mature: 55679
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQPSLIGPAILIVLLITLPLASIGDLILDQIGWQPLWLIGASIIAGMEAFALRMRMLAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LHEAEGGTLRYLAAEIFALVVLARLVATLGFGGEGIRAMMSWITDPLAFFDVPFLICLLA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTVVMLSRSGIAAIAAITPNPPQKMPLYTLDVLFYNSDAKIRRWNAVKAIISGVSWGGL HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCE LIIWLQSWRPGNADAFSGWIALYLIGGLSLIELARRRASLADWQSDGAEVAVDVQRSWHL EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH LSVMLIGLMIVLTLVFPFPREMSMPEEWRRAIYSLVGLVIFIGLIASLLFVGLISLIMLL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLLYLLLNWLLTTNSTSAAMPIPQPPLIPPATASEPMVWPGLIFWFCVAVLTVLAFWRI HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARRQTWLKAAWVNAVTWLTAWWHHLRHRRIGGWPHWWHSQEEPPPPPHSRRSRSGPVDTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH IACYHAALRHATARGYPRRPPQTPAEYAERISGELPAGAAELQALTEAYQRVVYAGKPFD HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC RSERRQFSALLRRFRRKV HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHQPSLIGPAILIVLLITLPLASIGDLILDQIGWQPLWLIGASIIAGMEAFALRMRMLAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LHEAEGGTLRYLAAEIFALVVLARLVATLGFGGEGIRAMMSWITDPLAFFDVPFLICLLA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTVVMLSRSGIAAIAAITPNPPQKMPLYTLDVLFYNSDAKIRRWNAVKAIISGVSWGGL HHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCE LIIWLQSWRPGNADAFSGWIALYLIGGLSLIELARRRASLADWQSDGAEVAVDVQRSWHL EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH LSVMLIGLMIVLTLVFPFPREMSMPEEWRRAIYSLVGLVIFIGLIASLLFVGLISLIMLL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLLYLLLNWLLTTNSTSAAMPIPQPPLIPPATASEPMVWPGLIFWFCVAVLTVLAFWRI HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARRQTWLKAAWVNAVTWLTAWWHHLRHRRIGGWPHWWHSQEEPPPPPHSRRSRSGPVDTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH IACYHAALRHATARGYPRRPPQTPAEYAERISGELPAGAAELQALTEAYQRVVYAGKPFD HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC RSERRQFSALLRRFRRKV HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA