| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523468
Identifier: 222523468
GI number: 222523468
Start: 198618
End: 199736
Strand: Direct
Name: 222523468
Synonym: Chy400_0173
Alternate gene names: NA
Gene position: 198618-199736 (Clockwise)
Preceding gene: 222523467
Following gene: 222523469
Centisome position: 3.77
GC content: 55.05
Gene sequence:
>1119_bases ATGACTGGAAAAAAAGCAATCCTCTCTCTGATCACCACTGCCCTTGTTCTGTTGCTGACAGCCTGTGGCGGTGGCGCAAC CAGCAGTTCACAGCCCACGCCAACGACCGAAGAAGCCCGCCCAACCCGCACCCCTCGCCCCGCCGGAAATGTTACATCAC CAACTACTGCGCCGACCACTGCTCCGACCACCGATACTACTGTCGAGCAAGCGCCAGTATTGAGCACGAACGCTGACCTG ACGGCACTGGGTAATGTGCAGGTAGAGATGAAGCTGGAAGGAACATCACAGGAATCAGGGCAGGAGGCAGAACCGTTCAA TCTGGTGATGCAGCAAATCATCCTCGCCAATGGTGATCGCAGTCTCACGATGGAAAGCACATCGCCCGAATCTGGATTAG TTCGCATTATCAGCGTTCAGGTTGGCGGTCAGGTGTACCAGTATGTAGAAGACAGCAATCAGCCGTACTGTATGGCCATG GGGAACTTCGATCTGTTCAGTGGGAGCATGCTCACTCCCGACGCCCTGATCGGTAGCATCCCAGAGGCACAGCTCGTTGA GCGAGGGGTGCAGGTCAACGGTTTTACCACTGATCGCTACACCTTTACTATCAATGAACAGACCCCCAATTATCAGGGTG AGGCCAAAGGCGAAATCTGGGCTGCACAAGACCCGGCAGTTGTCGTGCGGCATATTGGTGAATTTACCGGCACGATCACA GGTGTCACTACGGAAGAAGGTGGAACACCGCTCCCTGGCCAACTGGGCAACATCCGTTGGGAATACAACGTCACCCAACT GGACGCCAATACCAACATCACCCTGCCCGAAACCTGTGCTCAGCAGCAGGCCGCAGGTGCCGAGATTCCCCTACCGGCGA ATATCAGCAACAGGGTTCAGATGGGTGACCTGATCAGCTTTGAAACCACCGAGTCACCGGATAACATTGTCTCCTTCTAC CAGACCGAGATGGTGGCCCAGGGCTGGCAGGCCGGTGAAGTCAGTCAATACGGTAGCGATTACCAGCTCACCTTCAGCAA GGATGGGCGCACGGCGACCATTCTTGTCTCGGTGATTGATAATAAGACCAGCGTGATCATTATGCTCGCCTCATCGTAA
Upstream 100 bases:
>100_bases GTCATCTTGTTTCCCTTGTGAGACCTTCTCTCGCATGCTACAGTATCTGGCGGTGTCAACCCTGGACGCCTGCGGTTATC GTAACAAGGGAGCAATTTCG
Downstream 100 bases:
>100_bases GGTACGACCCATACGCAGGGAAACTTGCGGTCATCGTCAGCACAACTGAGCGTTACTTGAAACCGCTGCTCCAGGCGGGC GAAGCCACAACCTTCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTGKKAILSLITTALVLLLTACGGGATSSSQPTPTTEEARPTRTPRPAGNVTSPTTAPTTAPTTDTTVEQAPVLSTNADL TALGNVQVEMKLEGTSQESGQEAEPFNLVMQQIILANGDRSLTMESTSPESGLVRIISVQVGGQVYQYVEDSNQPYCMAM GNFDLFSGSMLTPDALIGSIPEAQLVERGVQVNGFTTDRYTFTINEQTPNYQGEAKGEIWAAQDPAVVVRHIGEFTGTIT GVTTEEGGTPLPGQLGNIRWEYNVTQLDANTNITLPETCAQQQAAGAEIPLPANISNRVQMGDLISFETTESPDNIVSFY QTEMVAQGWQAGEVSQYGSDYQLTFSKDGRTATILVSVIDNKTSVIIMLASS
Sequences:
>Translated_372_residues MTGKKAILSLITTALVLLLTACGGGATSSSQPTPTTEEARPTRTPRPAGNVTSPTTAPTTAPTTDTTVEQAPVLSTNADL TALGNVQVEMKLEGTSQESGQEAEPFNLVMQQIILANGDRSLTMESTSPESGLVRIISVQVGGQVYQYVEDSNQPYCMAM GNFDLFSGSMLTPDALIGSIPEAQLVERGVQVNGFTTDRYTFTINEQTPNYQGEAKGEIWAAQDPAVVVRHIGEFTGTIT GVTTEEGGTPLPGQLGNIRWEYNVTQLDANTNITLPETCAQQQAAGAEIPLPANISNRVQMGDLISFETTESPDNIVSFY QTEMVAQGWQAGEVSQYGSDYQLTFSKDGRTATILVSVIDNKTSVIIMLASS >Mature_371_residues TGKKAILSLITTALVLLLTACGGGATSSSQPTPTTEEARPTRTPRPAGNVTSPTTAPTTAPTTDTTVEQAPVLSTNADLT ALGNVQVEMKLEGTSQESGQEAEPFNLVMQQIILANGDRSLTMESTSPESGLVRIISVQVGGQVYQYVEDSNQPYCMAMG NFDLFSGSMLTPDALIGSIPEAQLVERGVQVNGFTTDRYTFTINEQTPNYQGEAKGEIWAAQDPAVVVRHIGEFTGTITG VTTEEGGTPLPGQLGNIRWEYNVTQLDANTNITLPETCAQQQAAGAEIPLPANISNRVQMGDLISFETTESPDNIVSFYQ TEMVAQGWQAGEVSQYGSDYQLTFSKDGRTATILVSVIDNKTSVIIMLASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39604; Mature: 39472
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKKAILSLITTALVLLLTACGGGATSSSQPTPTTEEARPTRTPRPAGNVTSPTTAPTT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTTDTTVEQAPVLSTNADLTALGNVQVEMKLEGTSQESGQEAEPFNLVMQQIILANGDR CCCCCCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC SLTMESTSPESGLVRIISVQVGGQVYQYVEDSNQPYCMAMGNFDLFSGSMLTPDALIGSI EEEEECCCCCCCEEEEEEEEECCCEEHHHHCCCCCEEEEECCCEEECCCCCCHHHHHCCC PEAQLVERGVQVNGFTTDRYTFTINEQTPNYQGEAKGEIWAAQDPAVVVRHIGEFTGTIT CHHHHHHCCCEECCEEECEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCEEE GVTTEEGGTPLPGQLGNIRWEYNVTQLDANTNITLPETCAQQQAAGAEIPLPANISNRVQ EEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEE MGDLISFETTESPDNIVSFYQTEMVAQGWQAGEVSQYGSDYQLTFSKDGRTATILVSVID ECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCCEEEEEEEEEC NKTSVIIMLASS CCCEEEEEEECC >Mature Secondary Structure TGKKAILSLITTALVLLLTACGGGATSSSQPTPTTEEARPTRTPRPAGNVTSPTTAPTT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APTTDTTVEQAPVLSTNADLTALGNVQVEMKLEGTSQESGQEAEPFNLVMQQIILANGDR CCCCCCCCCCCCEEECCCCEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCC SLTMESTSPESGLVRIISVQVGGQVYQYVEDSNQPYCMAMGNFDLFSGSMLTPDALIGSI EEEEECCCCCCCEEEEEEEEECCCEEHHHHCCCCCEEEEECCCEEECCCCCCHHHHHCCC PEAQLVERGVQVNGFTTDRYTFTINEQTPNYQGEAKGEIWAAQDPAVVVRHIGEFTGTIT CHHHHHHCCCEECCEEECEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCEEE GVTTEEGGTPLPGQLGNIRWEYNVTQLDANTNITLPETCAQQQAAGAEIPLPANISNRVQ EEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEE MGDLISFETTESPDNIVSFYQTEMVAQGWQAGEVSQYGSDYQLTFSKDGRTATILVSVID ECCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCCEEEEEEEEEC NKTSVIIMLASS CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA