| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523461
Identifier: 222523461
GI number: 222523461
Start: 193436
End: 193930
Strand: Direct
Name: 222523461
Synonym: Chy400_0166
Alternate gene names: NA
Gene position: 193436-193930 (Clockwise)
Preceding gene: 222523456
Following gene: 222523462
Centisome position: 3.67
GC content: 53.13
Gene sequence:
>495_bases ATGCCTATTTTAATCGATGGCCACAATCTGATCGGTCAAATGCCCGACATTGAACTCAGCGATCCCGATGACGAAGCAAA GCTGGTCGCTAAACTACGTCGCTACGTCGCCAAAAAGCGTGGCCGGAAAATTGTGGTTGTGTTTGATGGTGGTGTCTATG GTCATCCCCAAAATCTCAACGGGTTCGGAGTTGAGACACGCTTTGTTAAACCACCACAGAATGCCGACCACGAGTTGATC AGGCAAATTCGGGCGATTCGCCGCTGCGATGAGTGGCTGGTCGTCTCCTCGGATCGGGCAGTGGTCGGTGAAGCGCAAGC CCGTGGCATTCGGGTGATGTCGGCCCAAGAGTTTGCCCGCCGTTTGCAGATGCTCGATCAGCCGCGCATCAATGCGCGTG ATAAACGGGGCGACCGCCCTTTGAGTAAGGCCGAAGTCGAAGAATGGCTACGTTTTTTTGGGGTTGATGAGGACGAAGAT ACCTTATACTACTAA
Upstream 100 bases:
>100_bases ACGCCGATCAATCAATCAAGGAACTATCATTATCAACGTCACCAAAAGCAGATTATGCATATTCTGCTTTAACCAATCAC TCTTCAGGTACAATACAGAC
Downstream 100 bases:
>100_bases CGCTATGCCAGACCCGGTTACAGAACAAAACCGTCGCTCGTGGAATGCGGTTGTGCCTGCCCACGTCAGCCATCGCGCCG ATGAAGCGGCGTTTCTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPILIDGHNLIGQMPDIELSDPDDEAKLVAKLRRYVAKKRGRKIVVVFDGGVYGHPQNLNGFGVETRFVKPPQNADHELI RQIRAIRRCDEWLVVSSDRAVVGEAQARGIRVMSAQEFARRLQMLDQPRINARDKRGDRPLSKAEVEEWLRFFGVDEDED TLYY
Sequences:
>Translated_164_residues MPILIDGHNLIGQMPDIELSDPDDEAKLVAKLRRYVAKKRGRKIVVVFDGGVYGHPQNLNGFGVETRFVKPPQNADHELI RQIRAIRRCDEWLVVSSDRAVVGEAQARGIRVMSAQEFARRLQMLDQPRINARDKRGDRPLSKAEVEEWLRFFGVDEDED TLYY >Mature_163_residues PILIDGHNLIGQMPDIELSDPDDEAKLVAKLRRYVAKKRGRKIVVVFDGGVYGHPQNLNGFGVETRFVKPPQNADHELIR QIRAIRRCDEWLVVSSDRAVVGEAQARGIRVMSAQEFARRLQMLDQPRINARDKRGDRPLSKAEVEEWLRFFGVDEDEDT LYY
Specific function: Unknown
COG id: COG3688
COG function: function code R; Predicted RNA-binding protein containing a PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18872; Mature: 18741
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILIDGHNLIGQMPDIELSDPDDEAKLVAKLRRYVAKKRGRKIVVVFDGGVYGHPQNLN CCEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC GFGVETRFVKPPQNADHELIRQIRAIRRCDEWLVVSSDRAVVGEAQARGIRVMSAQEFAR CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEECCHHHCCEEEECHHHHHH RLQMLDQPRINARDKRGDRPLSKAEVEEWLRFFGVDEDEDTLYY HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PILIDGHNLIGQMPDIELSDPDDEAKLVAKLRRYVAKKRGRKIVVVFDGGVYGHPQNLN CEEECCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC GFGVETRFVKPPQNADHELIRQIRAIRRCDEWLVVSSDRAVVGEAQARGIRVMSAQEFAR CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEECCHHHCCEEEECHHHHHH RLQMLDQPRINARDKRGDRPLSKAEVEEWLRFFGVDEDEDTLYY HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA