| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523421
Identifier: 222523421
GI number: 222523421
Start: 153603
End: 155693
Strand: Direct
Name: 222523421
Synonym: Chy400_0124
Alternate gene names: NA
Gene position: 153603-155693 (Clockwise)
Preceding gene: 222523416
Following gene: 222523422
Centisome position: 2.92
GC content: 58.06
Gene sequence:
>2091_bases GTGAATATCACAAATCTTCCGCAACGACCGGTTTATCCTTTCTCCGCCATCGTCGGCCAAGAGCGTTTGAAGCGCGCACT GATCCTCAACGCGATCAATTCACGGATCGGCGGCGTGCTGATCAGGGGTGAGAAAGGAACAGCAAAATCAACTGCTGTAC GTGCGCTAACCCGCCTGCTACCATCAATTACCGTGGTGGTTGATTGTCCGTACAGTTGCGACCCCGACACTCCAGCCGCC CTGTGTGCCGATTGTCAGGAGCGTTTGAAGCAAGGGCCGCTGCCAACGATGGTTCGCCCGATCCGTCTGGTTGAATTACC GGTTTCGGCATCCGAAGATCGAGTTGTTGGTTCGCTTGACCTCGAACACGCGATCACGGAAGGCCAGCGCCGCTTTGAAC CAGGACTTCTGGCACAGGTGAATCGTGGCGTTCTGTATGTAGATGAAGTCAATCTCCTCGACGATCACCTGGTAGACCTC TTGCTCGACGCTGCCGCGATGGGCATCAATACGGTCGAGCGCGAGGGGGTGAGTGTCTCGCATCCGGCTCGCTTTATCCT GGTTGGCACGATGAACCCGGAAGAGGGTGAGTTGCGTCCGCAACTTCTCGACCGGTTCGGGCTGGCAGTAGAAGTCGTCG GTCTCACCGATGTCAACGACCGGATCGCCGTGATCGAGCGCCGTATGGCCTATGAAGCTGATCCAATTGGCTTCATCCAG CAATGGCAGGCTGCCGAGGAGACGTTAGCCCAGCGGATTGCTGCTGCCCGTGCGTTGTTGCCCCACGTGCGGATTGATCG CACCGATATGGCAGTAGTTGCCAGCCTGTGCATCGAAATGGGGGTCGATGGTCATCGGGCCGACCTGACCATTCTGGAGA CGGCGCGCACCCACGCTGCCTGGAGTGGCCGACGCACACTGGTAGCCGAAGACATTCGTCTCGCTGCCGAGCTGGCGCTG CCACATCGTATGCGTCGCCAACCGTTCGGTGAAGTCAAACTTGATGAGCAACGATTGGCGAGTATTCTCGATCAGTACGG GAAACGGGCAGAAGAGGTGAGTGTGCAGGCGGAAGTAAAAAAAAACCCTGACCTCACCGATGTGAGCGAGACGAACGACG AAGGTGGCAACGAGAGTGGCGGAGGTAGTACAACCATGCCTCTCGGTGGTGCCGGGCAACCAGAAGCGACAGCACCTGTA AGCGAACAGCAGACCGGTGGAACACAACACCGTGCCGGCGATCTGTTTAAGCCGCGTCGCCTGGAAGCAACACCCGACCG CACCCAACGACGTGCACCCGGACGACGTTCACGCTCGCGCACGACACGGAAGCAGGGCCGCTATATCACGAGCCGCCGTG CCACAAAGGTAACCGATCTGGCGCTCGATGCGACCTTGCGTGAAGCAGCTATCTACCAGCGCAAGCGGCGTACCGAGTTG TTGCATACCGTTGGTATGCCCCACCGGCGCCGACCGAAGATACTGATTAAGCGTACCGACCTGCGCCAAAAGGTGCGGGT ACGCCGGACACGCAATGCGGTCTGTTTTGTGGTGGATGCCAGTTGGAGTATGGCTGCCGAAGAGCGGATGCAGGCAACGA AAGCGGCTGTTCTCTCGCTGCTGCGCGATGCGTATCAACGCCGCGACCAGGTTGGTCTGGTCAGTTTCCAGCGCGATTAC GCTCGCGTGCTCCTGCCGCTCACCAATAGCGTCGAACTGGCGCAACGGCGCCTGCAATCGATGCCAACCGGTGGCAAGAC GCCATTATCGCGTGGGATGCTAACCGCGTTCGAGTTGCTTGAGCGGGCGCGCCGCCGTGATGCAGAGGTAGTACCGCTGA TGGTTCTATTGACCGATGGTCAGGCAAATGTCTCTATCTCCGATCTGCCGCCTCAACAAGAGGCGTATCGGATTGCCGAG ATGATTGCTGAACATCAAATTCATGCGATTGTCATCGATACCGAACACCCACACTTTGAACGAGGGCTATCACGACGACT GGCAGAGTATCTGCGCGGAACATACTACCGGCTGGAAGATCTCCATGATGATGGTCTGGTGAGGGCTGTACGGCAACAGA TGAGATCATAA
Upstream 100 bases:
>100_bases CAGGTTCGCCCGTCGGATGAAGAACATGCTGCATTCTAAAACTGCGCGGCATTGCTGCTATGGCTTCTGGCTCACGCTGA GCTAGAAGATTTTTGTTGTC
Downstream 100 bases:
>100_bases CTATTGTCGGTGAGCGTCGGGCAATTCTGTTGTCAGATGCTACAAGCATAATTGGGTAACCTGTCATTACGCGAGGAGGA AGGTAGGCAATGACGGATCA
Product: magnesium chelatase
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MNITNLPQRPVYPFSAIVGQERLKRALILNAINSRIGGVLIRGEKGTAKSTAVRALTRLLPSITVVVDCPYSCDPDTPAA LCADCQERLKQGPLPTMVRPIRLVELPVSASEDRVVGSLDLEHAITEGQRRFEPGLLAQVNRGVLYVDEVNLLDDHLVDL LLDAAAMGINTVEREGVSVSHPARFILVGTMNPEEGELRPQLLDRFGLAVEVVGLTDVNDRIAVIERRMAYEADPIGFIQ QWQAAEETLAQRIAAARALLPHVRIDRTDMAVVASLCIEMGVDGHRADLTILETARTHAAWSGRRTLVAEDIRLAAELAL PHRMRRQPFGEVKLDEQRLASILDQYGKRAEEVSVQAEVKKNPDLTDVSETNDEGGNESGGGSTTMPLGGAGQPEATAPV SEQQTGGTQHRAGDLFKPRRLEATPDRTQRRAPGRRSRSRTTRKQGRYITSRRATKVTDLALDATLREAAIYQRKRRTEL LHTVGMPHRRRPKILIKRTDLRQKVRVRRTRNAVCFVVDASWSMAAEERMQATKAAVLSLLRDAYQRRDQVGLVSFQRDY ARVLLPLTNSVELAQRRLQSMPTGGKTPLSRGMLTAFELLERARRRDAEVVPLMVLLTDGQANVSISDLPPQQEAYRIAE MIAEHQIHAIVIDTEHPHFERGLSRRLAEYLRGTYYRLEDLHDDGLVRAVRQQMRS
Sequences:
>Translated_696_residues MNITNLPQRPVYPFSAIVGQERLKRALILNAINSRIGGVLIRGEKGTAKSTAVRALTRLLPSITVVVDCPYSCDPDTPAA LCADCQERLKQGPLPTMVRPIRLVELPVSASEDRVVGSLDLEHAITEGQRRFEPGLLAQVNRGVLYVDEVNLLDDHLVDL LLDAAAMGINTVEREGVSVSHPARFILVGTMNPEEGELRPQLLDRFGLAVEVVGLTDVNDRIAVIERRMAYEADPIGFIQ QWQAAEETLAQRIAAARALLPHVRIDRTDMAVVASLCIEMGVDGHRADLTILETARTHAAWSGRRTLVAEDIRLAAELAL PHRMRRQPFGEVKLDEQRLASILDQYGKRAEEVSVQAEVKKNPDLTDVSETNDEGGNESGGGSTTMPLGGAGQPEATAPV SEQQTGGTQHRAGDLFKPRRLEATPDRTQRRAPGRRSRSRTTRKQGRYITSRRATKVTDLALDATLREAAIYQRKRRTEL LHTVGMPHRRRPKILIKRTDLRQKVRVRRTRNAVCFVVDASWSMAAEERMQATKAAVLSLLRDAYQRRDQVGLVSFQRDY ARVLLPLTNSVELAQRRLQSMPTGGKTPLSRGMLTAFELLERARRRDAEVVPLMVLLTDGQANVSISDLPPQQEAYRIAE MIAEHQIHAIVIDTEHPHFERGLSRRLAEYLRGTYYRLEDLHDDGLVRAVRQQMRS >Mature_696_residues MNITNLPQRPVYPFSAIVGQERLKRALILNAINSRIGGVLIRGEKGTAKSTAVRALTRLLPSITVVVDCPYSCDPDTPAA LCADCQERLKQGPLPTMVRPIRLVELPVSASEDRVVGSLDLEHAITEGQRRFEPGLLAQVNRGVLYVDEVNLLDDHLVDL LLDAAAMGINTVEREGVSVSHPARFILVGTMNPEEGELRPQLLDRFGLAVEVVGLTDVNDRIAVIERRMAYEADPIGFIQ QWQAAEETLAQRIAAARALLPHVRIDRTDMAVVASLCIEMGVDGHRADLTILETARTHAAWSGRRTLVAEDIRLAAELAL PHRMRRQPFGEVKLDEQRLASILDQYGKRAEEVSVQAEVKKNPDLTDVSETNDEGGNESGGGSTTMPLGGAGQPEATAPV SEQQTGGTQHRAGDLFKPRRLEATPDRTQRRAPGRRSRSRTTRKQGRYITSRRATKVTDLALDATLREAAIYQRKRRTEL LHTVGMPHRRRPKILIKRTDLRQKVRVRRTRNAVCFVVDASWSMAAEERMQATKAAVLSLLRDAYQRRDQVGLVSFQRDY ARVLLPLTNSVELAQRRLQSMPTGGKTPLSRGMLTAFELLERARRRDAEVVPLMVLLTDGQANVSISDLPPQQEAYRIAE MIAEHQIHAIVIDTEHPHFERGLSRRLAEYLRGTYYRLEDLHDDGLVRAVRQQMRS
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR012804 - InterPro: IPR002035 [H]
Pfam domain/function: PF07728 AAA_5; PF00092 VWA [H]
EC number: 6.6.1.1
Molecular weight: Translated: 77728; Mature: 77728
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITNLPQRPVYPFSAIVGQERLKRALILNAINSRIGGVLIRGEKGTAKSTAVRALTRLL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH PSITVVVDCPYSCDPDTPAALCADCQERLKQGPLPTMVRPIRLVELPVSASEDRVVGSLD CCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCEEECCC LEHAITEGQRRFEPGLLAQVNRGVLYVDEVNLLDDHLVDLLLDAAAMGINTVEREGVSVS HHHHHHCCHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC HPARFILVGTMNPEEGELRPQLLDRFGLAVEVVGLTDVNDRIAVIERRMAYEADPIGFIQ CCCEEEEEECCCCCCCCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHH QWQAAEETLAQRIAAARALLPHVRIDRTDMAVVASLCIEMGVDGHRADLTILETARTHAA HHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH WSGRRTLVAEDIRLAAELALPHRMRRQPFGEVKLDEQRLASILDQYGKRAEEVSVQAEVK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEEEEC KNPDLTDVSETNDEGGNESGGGSTTMPLGGAGQPEATAPVSEQQTGGTQHRAGDLFKPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC LEATPDRTQRRAPGRRSRSRTTRKQGRYITSRRATKVTDLALDATLREAAIYQRKRRTEL CCCCCCHHHHCCCCCHHHHHHHHHHCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHTVGMPHRRRPKILIKRTDLRQKVRVRRTRNAVCFVVDASWSMAAEERMQATKAAVLSL HHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH LRDAYQRRDQVGLVSFQRDYARVLLPLTNSVELAQRRLQSMPTGGKTPLSRGMLTAFELL HHHHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ERARRRDAEVVPLMVLLTDGQANVSISDLPPQQEAYRIAEMIAEHQIHAIVIDTEHPHFE HHHHHCCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHH RGLSRRLAEYLRGTYYRLEDLHDDGLVRAVRQQMRS HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MNITNLPQRPVYPFSAIVGQERLKRALILNAINSRIGGVLIRGEKGTAKSTAVRALTRLL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH PSITVVVDCPYSCDPDTPAALCADCQERLKQGPLPTMVRPIRLVELPVSASEDRVVGSLD CCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCCCCCEEECCC LEHAITEGQRRFEPGLLAQVNRGVLYVDEVNLLDDHLVDLLLDAAAMGINTVEREGVSVS HHHHHHCCHHHCCCCHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC HPARFILVGTMNPEEGELRPQLLDRFGLAVEVVGLTDVNDRIAVIERRMAYEADPIGFIQ CCCEEEEEECCCCCCCCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHH QWQAAEETLAQRIAAARALLPHVRIDRTDMAVVASLCIEMGVDGHRADLTILETARTHAA HHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH WSGRRTLVAEDIRLAAELALPHRMRRQPFGEVKLDEQRLASILDQYGKRAEEVSVQAEVK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHEEEEEEC KNPDLTDVSETNDEGGNESGGGSTTMPLGGAGQPEATAPVSEQQTGGTQHRAGDLFKPRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC LEATPDRTQRRAPGRRSRSRTTRKQGRYITSRRATKVTDLALDATLREAAIYQRKRRTEL CCCCCCHHHHCCCCCHHHHHHHHHHCCEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHTVGMPHRRRPKILIKRTDLRQKVRVRRTRNAVCFVVDASWSMAAEERMQATKAAVLSL HHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH LRDAYQRRDQVGLVSFQRDYARVLLPLTNSVELAQRRLQSMPTGGKTPLSRGMLTAFELL HHHHHHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH ERARRRDAEVVPLMVLLTDGQANVSISDLPPQQEAYRIAEMIAEHQIHAIVIDTEHPHFE HHHHHCCCCEEEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHH RGLSRRLAEYLRGTYYRLEDLHDDGLVRAVRQQMRS HHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]