| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mreC [H]
Identifier: 222523419
GI number: 222523419
Start: 151263
End: 152171
Strand: Reverse
Name: mreC [H]
Synonym: Chy400_0122
Alternate gene names: 222523419
Gene position: 152171-151263 (Counterclockwise)
Preceding gene: 222523420
Following gene: 222523418
Centisome position: 2.89
GC content: 57.21
Gene sequence:
>909_bases ATGCGCGATTTTCTCGACGAACGACCGTTAAAACTGCGGCGTGAAGTAGCCGGTGACCGTGGCTACTGGCGGGTCTTTGC GCTGGCCTTGAGCCTGGTATTGGTCAGTGTCCTGCTGATTGTCCTTGATCGGCAGGGTGTGATTGCACCTGCACGGCTGA TGGTACGAGAGACGATCCAGCCGCTTGCCGGTTGGTTAACCCAGCGCCGCAGTGAGCTATTGTCGTGGTGGGCAACGCCG CGTGATGCGGCCACGATGCAGGCCAGGATTGCTGAACTTGAAGCGGAAAACACCCGTCTCGCCGCCGAAGTGTTGCGTCT TGAGCAGGCGCGGGTTGAGAATATTTTCTTGCGTCAGCAACTCGCGATTACGCAATCATACCCCTGGACTATTTTGGGCG CAGAGGTGATGATTCGCGCCCCCGATGCAGCACGGCGGGTCTTAACGATTGCCCGTGGTGCCAACGATGGAGTGCGCGTT GGGATGGCTGTGATTGGCCAGCAGCCAGGTGGGCCACCGGCGCTGATCGGTGTGGTGGAAGCAGTTGGACCACGAACTGC TGATGTTTTGATGATTACCGATATTAGCAGTCAATTGAGTGTGCGTTTGCTGCAAGCTGATACTGCACCGCTCGGTCTGA TGCAAGGGCAATGGCAGCGGGGATCACGGATGCGGGTAGAGTTGATTGATCGCAGTATTACCATGCGCGAGGGCGATCAC GTGGTCACAGCCGGTATTAGTGGGGCGCTTAATCTTCCACTCGATCTGGCATCAATGCCGACCGCAGTACCGATTGGGGT TGTGGAAGCGGTGCGTCAGGAAGGTCAACGGCAAATTGGCGAGATTCGGCCATTCGTCGATCCGGATCAGGTGCGCTACG TGTGGGTAATTCTCAGCCAAGACGATTAG
Upstream 100 bases:
>100_bases GGCACGGGGGGCAGGGAAGATGGTTGAACACTTCGACAACAGCGTCTACCAGGATATTCTGATGCGCACCCAGACGACGC GGCGGGTGCGGAGATAGTCC
Downstream 100 bases:
>100_bases AAGAACGCCTGGCCCGCGAGCTGGGTTTGCTGCTGATCCTGCTGGTAATCGCACTGATCCAGGTGACGCTCTTAACCGGC CCGACAGGGTTTTCTGTGCC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRDFLDERPLKLRREVAGDRGYWRVFALALSLVLVSVLLIVLDRQGVIAPARLMVRETIQPLAGWLTQRRSELLSWWATP RDAATMQARIAELEAENTRLAAEVLRLEQARVENIFLRQQLAITQSYPWTILGAEVMIRAPDAARRVLTIARGANDGVRV GMAVIGQQPGGPPALIGVVEAVGPRTADVLMITDISSQLSVRLLQADTAPLGLMQGQWQRGSRMRVELIDRSITMREGDH VVTAGISGALNLPLDLASMPTAVPIGVVEAVRQEGQRQIGEIRPFVDPDQVRYVWVILSQDD
Sequences:
>Translated_302_residues MRDFLDERPLKLRREVAGDRGYWRVFALALSLVLVSVLLIVLDRQGVIAPARLMVRETIQPLAGWLTQRRSELLSWWATP RDAATMQARIAELEAENTRLAAEVLRLEQARVENIFLRQQLAITQSYPWTILGAEVMIRAPDAARRVLTIARGANDGVRV GMAVIGQQPGGPPALIGVVEAVGPRTADVLMITDISSQLSVRLLQADTAPLGLMQGQWQRGSRMRVELIDRSITMREGDH VVTAGISGALNLPLDLASMPTAVPIGVVEAVRQEGQRQIGEIRPFVDPDQVRYVWVILSQDD >Mature_302_residues MRDFLDERPLKLRREVAGDRGYWRVFALALSLVLVSVLLIVLDRQGVIAPARLMVRETIQPLAGWLTQRRSELLSWWATP RDAATMQARIAELEAENTRLAAEVLRLEQARVENIFLRQQLAITQSYPWTILGAEVMIRAPDAARRVLTIARGANDGVRV GMAVIGQQPGGPPALIGVVEAVGPRTADVLMITDISSQLSVRLLQADTAPLGLMQGQWQRGSRMRVELIDRSITMREGDH VVTAGISGALNLPLDLASMPTAVPIGVVEAVRQEGQRQIGEIRPFVDPDQVRYVWVILSQDD
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 33414; Mature: 33414
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFLDERPLKLRREVAGDRGYWRVFALALSLVLVSVLLIVLDRQGVIAPARLMVRETIQ CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH PLAGWLTQRRSELLSWWATPRDAATMQARIAELEAENTRLAAEVLRLEQARVENIFLRQQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAITQSYPWTILGAEVMIRAPDAARRVLTIARGANDGVRVGMAVIGQQPGGPPALIGVVE HHHHCCCCEEEECCEEEEECCHHHHHHHHHHCCCCCCCEEHHHEECCCCCCCHHHHHHHH AVGPRTADVLMITDISSQLSVRLLQADTAPLGLMQGQWQRGSRMRVELIDRSITMREGDH HCCCCCCCEEEEEECCHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCE VVTAGISGALNLPLDLASMPTAVPIGVVEAVRQEGQRQIGEIRPFVDPDQVRYVWVILSQ EEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEC DD CC >Mature Secondary Structure MRDFLDERPLKLRREVAGDRGYWRVFALALSLVLVSVLLIVLDRQGVIAPARLMVRETIQ CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH PLAGWLTQRRSELLSWWATPRDAATMQARIAELEAENTRLAAEVLRLEQARVENIFLRQQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAITQSYPWTILGAEVMIRAPDAARRVLTIARGANDGVRVGMAVIGQQPGGPPALIGVVE HHHHCCCCEEEECCEEEEECCHHHHHHHHHHCCCCCCCEEHHHEECCCCCCCHHHHHHHH AVGPRTADVLMITDISSQLSVRLLQADTAPLGLMQGQWQRGSRMRVELIDRSITMREGDH HCCCCCCCEEEEEECCHHHEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCE VVTAGISGALNLPLDLASMPTAVPIGVVEAVRQEGQRQIGEIRPFVDPDQVRYVWVILSQ EEEECCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEC DD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]