| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523338
Identifier: 222523338
GI number: 222523338
Start: 41254
End: 41688
Strand: Direct
Name: 222523338
Synonym: Chy400_0039
Alternate gene names: NA
Gene position: 41254-41688 (Clockwise)
Preceding gene: 222523337
Following gene: 222523339
Centisome position: 0.78
GC content: 51.72
Gene sequence:
>435_bases ATGCCATTCTTCAAAGACGAGGCAGAACTGCGTCAAATCTTAGGTGAACTGTATGACCGGGTGAAATGTGATGCCCAGAT TGCACCCCGAATTTGTGAAGGACGCATCGTCATTCAGTTCCGCTACGAAGAACCGCACGGTGTTGTCACCATCGATGCTG CTCACCCGCCAACGCAGCCCGGCGCGTTTTGCGATGTGTTTTGGGGTGAAGTAGACCTGAAGCCAGATGTTGAAATGAGC ATGAAGGCGGATATTGCGCATCAATTCTGGCATGGTAAGATTAATCTGATGACCGCCCTGGCTCGACGCCAGATTATTGC TAAAGGACCGATTCCCAAGATTCTCAAACTGCTACCCGCGGTTGAACCAATGTACACCCTGTACCCGCGGATGCTGAGAG AGATGGGACGCGAAGACCTGGTATTAACCCGGTAG
Upstream 100 bases:
>100_bases TACCCTCTTGCGTTCTCCTGCTGAACCTCGTATAATCGTTTTCACAGGATTTTCCTACAGTACAGCACCGTCATTCACAG ACGGCAAAGGGAGATGAACA
Downstream 100 bases:
>100_bases TACTCGACATGGATGTATGCCAACCACGAGTGAGATGTATGAACGCGGTGCTGCCGATGCCGAGCGTGGTGAATTTAATC CGTTCTACTATCAGCACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPFFKDEAELRQILGELYDRVKCDAQIAPRICEGRIVIQFRYEEPHGVVTIDAAHPPTQPGAFCDVFWGEVDLKPDVEMS MKADIAHQFWHGKINLMTALARRQIIAKGPIPKILKLLPAVEPMYTLYPRMLREMGREDLVLTR
Sequences:
>Translated_144_residues MPFFKDEAELRQILGELYDRVKCDAQIAPRICEGRIVIQFRYEEPHGVVTIDAAHPPTQPGAFCDVFWGEVDLKPDVEMS MKADIAHQFWHGKINLMTALARRQIIAKGPIPKILKLLPAVEPMYTLYPRMLREMGREDLVLTR >Mature_143_residues PFFKDEAELRQILGELYDRVKCDAQIAPRICEGRIVIQFRYEEPHGVVTIDAAHPPTQPGAFCDVFWGEVDLKPDVEMSM KADIAHQFWHGKINLMTALARRQIIAKGPIPKILKLLPAVEPMYTLYPRMLREMGREDLVLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16574; Mature: 16443
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFKDEAELRQILGELYDRVKCDAQIAPRICEGRIVIQFRYEEPHGVVTIDAAHPPTQP CCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC GAFCDVFWGEVDLKPDVEMSMKADIAHQFWHGKINLMTALARRQIIAKGPIPKILKLLPA CCEEEEECCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC VEPMYTLYPRMLREMGREDLVLTR CCHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure PFFKDEAELRQILGELYDRVKCDAQIAPRICEGRIVIQFRYEEPHGVVTIDAAHPPTQP CCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCC GAFCDVFWGEVDLKPDVEMSMKADIAHQFWHGKINLMTALARRQIIAKGPIPKILKLLPA CCEEEEECCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCC VEPMYTLYPRMLREMGREDLVLTR CCHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA