Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109153

Identifier: 222109153

GI number: 222109153

Start: 45192

End: 45626

Strand: Direct

Name: 222109153

Synonym: Avi_9545

Alternate gene names: NA

Gene position: 45192-45626 (Clockwise)

Preceding gene: 222109151

Following gene: 222109154

Centisome position: 34.65

GC content: 58.39

Gene sequence:

>435_bases
GTGGTAGAATATGGTGGAGGAACCCCTTTCTGCAACGCGCTGCCTGAGCGTCTCCGTAGCATCGTCGATATGATGACGCC
GCAACTCCTGGCCGAGACATGGCCCCTGCGGTTCGTCGCCCTGCTCTCGATGCTCGAGGATATGGCAGGCGAGGCAGGGG
AGGTTGACCGGCCTCTTGTCGTCAATAAGTGGGTGGCAATCGTCAGTGGCTTGCTTGAAAACCTGCCCCGTGACATGGAT
TCCTCCGAATGCCTTGCACTGATGCGCCACAGCGCGATTGAGACATTCCGGAAACGCGCGACACTGCAGTCACCGGACGT
AAGCCAGCAAGACGAACTCTTGCGAAGCACGTATCCACAATGGTCAGTGGTCGAAGATCTGCTCGACGAATACGAGGCAT
GGGCGGCCCACCAATTGCGGACGACTCGTCACTAG

Upstream 100 bases:

>100_bases
CGTGGAGGAGAAGTGGGTGCCGTTCTTCCGCGCCGGCAAGGAGCTCAGGGACCGCCTCAACGATGACGGAAGCTTGGTCG
AACATGAGGATTGAACATTG

Downstream 100 bases:

>100_bases
AGAAGAGGTACGGGGATGCCAACGGGGAAACTCAAATGGTTCGATACCACCAAAGGCTACGGTTTCATCACGTCTGACGA
CGGTGGTCCCGATGTCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVEYGGGTPFCNALPERLRSIVDMMTPQLLAETWPLRFVALLSMLEDMAGEAGEVDRPLVVNKWVAIVSGLLENLPRDMD
SSECLALMRHSAIETFRKRATLQSPDVSQQDELLRSTYPQWSVVEDLLDEYEAWAAHQLRTTRH

Sequences:

>Translated_144_residues
MVEYGGGTPFCNALPERLRSIVDMMTPQLLAETWPLRFVALLSMLEDMAGEAGEVDRPLVVNKWVAIVSGLLENLPRDMD
SSECLALMRHSAIETFRKRATLQSPDVSQQDELLRSTYPQWSVVEDLLDEYEAWAAHQLRTTRH
>Mature_144_residues
MVEYGGGTPFCNALPERLRSIVDMMTPQLLAETWPLRFVALLSMLEDMAGEAGEVDRPLVVNKWVAIVSGLLENLPRDMD
SSECLALMRHSAIETFRKRATLQSPDVSQQDELLRSTYPQWSVVEDLLDEYEAWAAHQLRTTRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16375; Mature: 16375

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEYGGGTPFCNALPERLRSIVDMMTPQLLAETWPLRFVALLSMLEDMAGEAGEVDRPLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
VNKWVAIVSGLLENLPRDMDSSECLALMRHSAIETFRKRATLQSPDVSQQDELLRSTYPQ
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
WSVVEDLLDEYEAWAAHQLRTTRH
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEYGGGTPFCNALPERLRSIVDMMTPQLLAETWPLRFVALLSMLEDMAGEAGEVDRPLV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
VNKWVAIVSGLLENLPRDMDSSECLALMRHSAIETFRKRATLQSPDVSQQDELLRSTYPQ
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
WSVVEDLLDEYEAWAAHQLRTTRH
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA