Definition | Agrobacterium radiobacter K84 plasmid pAtK84b, complete sequence. |
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Accession | NC_011990 |
Length | 184,668 |
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The map label for this gene is traA
Identifier: 222109003
GI number:
Start: 58322
End: 61654
Strand: Direct
Name: traA
Synonym: Arad_14094
Alternate gene names: NA
Gene position: NA
Preceding gene: 222108995
Following gene: 222109004
Centisome position: NA
GC content: NA
Gene sequence:
>3333_bases ATGACGTTCAAACCGGGAGCTTTTACCGCCGTGGCCATCGCCCACTTCTCAGCCAGCATCGTCAGCCGCGGCGGCGGCCG CAGTGTGGTGCTGTCTGCGGCCTACCGGCACTGCGCGAAGATGGAATACGAGCGCGAGGCGCGCACCGTCGACTACACCC GTAAGCAAGGTCTGGTGCATGAGGAATTCATGCTCCCGGCCGATGCCCCGAAATGGGTCCGCGCGATGCTCGCTGACCGC TCCGTTTCCGGTGCCTCGGAGGCCTTCTGGAACAAGGTCGAGGCTTTCGAAAAGCGCACCGACGCGCAGCTGGCTCGCGA CCTGACGATCGCACTGCCGCTGGAGCTTACACCCGAGCAGAACATCGCCTTGGTTCGTGATTTCGTGGAGAAACATATCC TGGCGAAGAACATGGTCGCCGATTGGGTCTATCACGATAATCCCGGCAATCCGCATATCCATCTGATGACCACATTGCGT CCGCTGACCGAGGACGGGTTCGGATCGAAGAAGGTGGCGGTCATCGGCGAGGACGGCCAGCCGGTCCGCACGAAGTCCGG GAAAATCCTCTATGAGCTCTGGGCGGGTTCGACCGACGACTTCAACGTCCTGCGCGATGGATGGTTCGAGCGGCTGAACC ATCACCTGGCGCTCGGCGGCATCGATCTCCGTATCGACGGCCGTTCCTACGAGAGGCAGGGTATCGAGCTCGAACCGACG ATCCATCTCGGCGTTGGCGCCAAGGCGATCGAGCGCAAGGCGCAGGAGCAGGGCGTCCGGCCAGAGCTTGAGCGCATCGA ATTGAACGAAGAGCGGCGGAGCGAGAATGCCCGCCGTATTCTTCGCAATCCGGGCATCGTGGTTGATCTTATCACCCGCG AGAAGAGCGTCTTCGATGAGCGCGATGTCGCCAAGGTTCTGCATCGTTATGTCGATGACCCGACTGTCTTCCAGCAACTG ATGTTACGCATCATCCTGAATCCGGAAGTCTTGCGTTTACAGCGTGACACGATCGAGTTCGCGACCGGAGAAAAGTTGCC GGCCCGTTATTCGACCCGGGCGATGATCCGGCTGGAAGCGACGATGGTGCGACAGGCTTTGTGGCTGTCGAACCGGGACG GTCATGCTGTCTTTGAAGCTGCTCTGGACGCAACGTTCCGGCGGCATGAGCGGTTGTCGCAGGAGCAGAAAACCGCGATC GAGCGGATCGCCGGTCCCGCCCGGATCGCGGCCGTGGTTGGACGTGCCGGCGCCGGCAAGACCACGATGATGAAAGCTGC CCGCGAGGCGTGGGAACTGGCCGGATATCGTGTGGTCGGCGGAGCGCTCGCCGGCAAGGCGGCGGAGGGTCTGGAAAAGG AGGCCGGGATCCAGAGCCGCACGCTCGCGTCGTGGGAGCTGCGCTGGAACCGTGGTCGTGACGCTCTCAATGACAAGACA GTCTTCGTCATGGACGAAGCGGGCATGGTCGCGTCGAAGCAGATGGCCGGCTTTGTCGATGCCGTCGTCAGGGCAGGTGC CAAGATCGTTCTGGTCGGCGATCCCGAACAGCTCCAGCCGATCGAGGCGGGCGCTGCCTTCCGCGCCATCGTTGACCGCA TAGGTTATGCCGAACTCGAGACAATCTATCGCCAGCGCGAGGACTGGATGCGCAAGGCGTCACTCGACCTGGCGCGAGGC AACGTGGAAAAGGCGCTGACCGCCTATGATGCCAATGTCAGGATCACGGGAACGCGCCTCAAGGCCGAGGCGGTCGAGCG GCTCATCGGTGACTGGAACCACGATTACGATCAGACGAAGACAACGCTGATCCTCGCGCATCTGCGCCGCGACGTTCGGA TGCTGAACATTATGGCCCGCGAAAAACTCGTTGAACGCGGCATTGTCGGTGAGGGCCATGTCTTTAAAACGGCTGACGGT ATTCGCCAATTCGACGTGGGCGACCAGATCGTCTTCTTGAAGAACGAGACCTCGCTCGGCGTCAAGAACGGCATGATCGC TCATGTCATCGAGGCCGCACCGAACAGGATCGTTGCTGTCGTCGGAGAGGGTGATCAGCGCCGGCAGGTCATCGTCGAGC AACGCTTCTACCGCAATCTCGATCATGGTTACGCCACGACGATCCATAAATCGCAAGGCGCTACCGTCGACCGCGTGAAG GTCTTGGCAAGCCTCTCGCTGGACCGGCATCTGACCTATGTGGCGATGACCCGCCATCGCGAGGATCTGCAGCTTTATTA CGGCCACCGATCCTTCGCCTTTAACGGCGGCCTGGCCAAGGTACTCTCCCGAAGACAAGCCAAGGAGACCACGCTCGATT ACGAGCGCGGAAAGCTTTACCGCGAGGCGCTGCGGTTTGCGGAAAGTCGCGGCCTTAACATCGTCCAGGTGGCCCGCACG CTCGTGCGCGACCGGCTCGACTGGACGCTGCGCCAGAAGACGAAATTGGTCGATCTCGGCCAGCGCCTTGCTGTCTTTGC AGAGCGTCTCGGTCTGCACCATCCCCCGAAAACCCAAACTATGAAGGAGGCTGCGCCCATGGTCGCAGGCATCAAGACAT TCACCGGTTCTGTCGCTGACACAGTCGGTGACAGGCTCGGCGCAGATCCCGCCCTGAAGCAACAATGGGAAGAAGTCTCC GCGCGGTTCCGCTACGTCTTCGCCGATCCCGAAACGGCATTCCGGGCGATGAACTTCGACGATGTTCTCGCCAACAAGGA GATCGCGCGTCAGGCGTTGCAGAAGGTCGAGACCGATCCGGCGTCGATCGGGCCGCTGAAAGGCAAGACCGGGATCCTCG CCAGCAAGGCTGATCGCGAGTCTCGCCGGGTGGCGGAGGTCAACGTGCCCGCCCTGAAGCGCGATCTCGAGCAGTATCTG CGGATGCGCGAAACTGCCGCGCAGAAGCTGCAGACGGAAGAGCAGGTATTGCGTCAGCGCGTTTCCATCGACATTCCGGC GCTGTCACCGGCAGCACATGTGGTGCTGGAGCGCGTGCGTGATGCGATCGACCGCAACGATCTGCCGGCGGCCATGGCCT ATGCATTGAGCAATCGGGAAACCAAACTGGAAATTGACGGGTTCAACCAAGCTGTCAGCCAGCGGTTCGGGGAACGCACA CTGCTCACCAATGCCGCGCGCGAACCCTCCGGAAAGCTCTTCGACAAACTCTCCGACGGGATGCAGCCCGAGCAGAAGGA GCGTCTGAAGGAAGCCTGGCCGATCATGCGCACGTCCCAGCAACTCGCCGCTCACGAACGCACCGTCCAGACCCTGCGGC AGGCCGAAGATCTTCGTCTCGCCCAGCGCCAGACGCCGGTGATGAAGCAATGA
Upstream 100 bases:
>100_bases CGAAGGAGCGGCTTCCAAGGGCGCAATTATACGTCGCTGACGCGACGCCTTGCGTAGGACCCCAAACAGGGGCCGACCAT GGCCTGACCGCTCCCGACGA
Downstream 100 bases:
>100_bases GCCGGCGGCTTCTCCTGTTCCTGGCTGGCGCGGGTGGGACGATCGCCGCTCTGGCGGCAATCGCATACTTCGGCGGCTTT CGATTGAACCTGACACCGAG
Product: Dtr system oriT relaxase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1110_residues MTFKPGAFTAVAIAHFSASIVSRGGGRSVVLSAAYRHCAKMEYEREARTVDYTRKQGLVHEEFMLPADAPKWVRAMLADR SVSGASEAFWNKVEAFEKRTDAQLARDLTIALPLELTPEQNIALVRDFVEKHILAKNMVADWVYHDNPGNPHIHLMTTLR PLTEDGFGSKKVAVIGEDGQPVRTKSGKILYELWAGSTDDFNVLRDGWFERLNHHLALGGIDLRIDGRSYERQGIELEPT IHLGVGAKAIERKAQEQGVRPELERIELNEERRSENARRILRNPGIVVDLITREKSVFDERDVAKVLHRYVDDPTVFQQL MLRIILNPEVLRLQRDTIEFATGEKLPARYSTRAMIRLEATMVRQALWLSNRDGHAVFEAALDATFRRHERLSQEQKTAI ERIAGPARIAAVVGRAGAGKTTMMKAAREAWELAGYRVVGGALAGKAAEGLEKEAGIQSRTLASWELRWNRGRDALNDKT VFVMDEAGMVASKQMAGFVDAVVRAGAKIVLVGDPEQLQPIEAGAAFRAIVDRIGYAELETIYRQREDWMRKASLDLARG NVEKALTAYDANVRITGTRLKAEAVERLIGDWNHDYDQTKTTLILAHLRRDVRMLNIMAREKLVERGIVGEGHVFKTADG IRQFDVGDQIVFLKNETSLGVKNGMIAHVIEAAPNRIVAVVGEGDQRRQVIVEQRFYRNLDHGYATTIHKSQGATVDRVK VLASLSLDRHLTYVAMTRHREDLQLYYGHRSFAFNGGLAKVLSRRQAKETTLDYERGKLYREALRFAESRGLNIVQVART LVRDRLDWTLRQKTKLVDLGQRLAVFAERLGLHHPPKTQTMKEAAPMVAGIKTFTGSVADTVGDRLGADPALKQQWEEVS ARFRYVFADPETAFRAMNFDDVLANKEIARQALQKVETDPASIGPLKGKTGILASKADRESRRVAEVNVPALKRDLEQYL RMRETAAQKLQTEEQVLRQRVSIDIPALSPAAHVVLERVRDAIDRNDLPAAMAYALSNRETKLEIDGFNQAVSQRFGERT LLTNAAREPSGKLFDKLSDGMQPEQKERLKEAWPIMRTSQQLAAHERTVQTLRQAEDLRLAQRQTPVMKQ
Sequences:
NA
Specific function: NA
COG id: COG0507
COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA