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The map label for this gene is yebA [C]

Identifier: 222095164

GI number: 222095164

Start: 1476383

End: 1477654

Strand: Reverse

Name: yebA [C]

Synonym: BCQ_1504

Alternate gene names: 222095164

Gene position: 1477654-1476383 (Counterclockwise)

Preceding gene: 222095174

Following gene: 222095163

Centisome position: 28.34

GC content: 35.85

Gene sequence:

>1272_bases
ATGAAAAAGAAATTTGTAGCGTTCAGCGTTTTAGCAGCAGGAACGATTTTTGCTTCCCCGTTACTTTCACCCGCATACGC
TGAAACGAATCAGGATAAATTATCTAATATTCAATCTGAATTAGAAGGAAAACAAAATGACTTACAAAATAAATCAGCCG
AGAAAGAACAAATAGAAAAAGAAATTCAAGAATTACAAAAGAAAATCGACGATTTAACTACTTCTATTAATAAAAACGAA
GCTGAATTAAACGATACAAAAAAAGAAATTAGTAAGACACAACAAGTAATTACTGAAAAAAAGAAACATATAGAGCAATT
ACAAACAAACATAGATACGCGTCAGGAAGTTATTAAGCAACGACTGCAATCTATGCAAGAAAAACCTCGCACAAATATCA
TTACGGAAGTATTAACAAATTCTGCAAACATTGCTGATCTTGTTGATAATATGTACTCTGTCAGTTTAATTTTAAATAAT
GATACTGATATTGTGAAAAAACAAACAAATGACCAAGATGCTGTGACGAAAGAAAAAGAGGCTGTTGAGAAAAAAGAGCA
ACAACTGAAAGAATCCGAGCAAAAATTAGAACAAAAACAACAAGAATTACAAAACAACCAACAACAGCAACAAACTCTTA
TTAGCGATCTACATACGAAAGTAGCAAAAGTAGATTCAGAGATTGAAGGATTAGAAGAATCTAAAGGCATTTTAGAAAAT
CAGCGTCAAGCTATTCAAAAGGCAATTGAAGAAGAAAAACGCGCAGAAGAAGCTCGTAAAGCTGAGGAAGCTCGCAAGGC
GGAAGAAGCTCGTAAACAAGCTGCTACATCTGCTCAAACAGCTCAAGCGGCCCCAACACCACACGATACAAACATCGGAG
GATTTATTAAACCAGCAGCTGGATCAAAAACTTCTGGTTTTGGCGTACGCTCTATAGATAACCATAAAGGAATCGATATT
GCTGCTTCAGGAACTGTTCCAATTATTGCCGCTGCAGATGGCGTTGTTATTCGCTCAGAATTATCATCTAGTTACGGAAA
TGTTGTGTACTTATCTCACCGTATTAACGGAAAAACATATACAACAGTATATGCTCATATGAGTAGCCGTTCTGTATCAA
ATGGACAAACTGTAAAACAAGGAACTCAACTTGGATTTATGGGGAATACTGGCCAATCATACGGACAACATTTACACTTC
GAACTTCATCTGGGAGAATGGAATGTCGGCAAGACAAACGCAGTTGATCCATCTCCTTATATCGGATTATAA

Upstream 100 bases:

>100_bases
CTTAGTAATTTTATAAAATTTTCTTTACATTATGGTTACAACGATAGACACTCTTCTTCTTATGATATATAACATTCATA
GGGAAAGGAGCCAGACAACC

Downstream 100 bases:

>100_bases
AAAAAACTCGGTGCATACCGAGTTCTTTTATTTCCACTTCACACACTATAGGCATTCTACATAGACTATAACTAAATGCC
TATAGTTTACGGGGTGAATT

Product: peptidase, m23/m37 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MKKKFVAFSVLAAGTIFASPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQVITEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTNSANIADLVDNMYSVSLILNN
DTDIVKKQTNDQDAVTKEKEAVEKKEQQLKESEQKLEQKQQELQNNQQQQQTLISDLHTKVAKVDSEIEGLEESKGILEN
QRQAIQKAIEEEKRAEEARKAEEARKAEEARKQAATSAQTAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDI
AASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHF
ELHLGEWNVGKTNAVDPSPYIGL

Sequences:

>Translated_423_residues
MKKKFVAFSVLAAGTIFASPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQVITEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTNSANIADLVDNMYSVSLILNN
DTDIVKKQTNDQDAVTKEKEAVEKKEQQLKESEQKLEQKQQELQNNQQQQQTLISDLHTKVAKVDSEIEGLEESKGILEN
QRQAIQKAIEEEKRAEEARKAEEARKAEEARKQAATSAQTAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDI
AASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHF
ELHLGEWNVGKTNAVDPSPYIGL
>Mature_423_residues
MKKKFVAFSVLAAGTIFASPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQVITEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTNSANIADLVDNMYSVSLILNN
DTDIVKKQTNDQDAVTKEKEAVEKKEQQLKESEQKLEQKQQELQNNQQQQQTLISDLHTKVAKVDSEIEGLEESKGILEN
QRQAIQKAIEEEKRAEEARKAEEARKAEEARKQAATSAQTAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDI
AASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHF
ELHLGEWNVGKTNAVDPSPYIGL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=90, Percent_Identity=37.7777777777778, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87082297, Length=454, Percent_Identity=22.2466960352423, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46895; Mature: 46895

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFVAFSVLAAGTIFASPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEK
CCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
EIQELQKKIDDLTTSINKNEAELNDTKKEISKTQQVITEKKKHIEQLQTNIDTRQEVIKQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLQSMQEKPRTNIITEVLTNSANIADLVDNMYSVSLILNNDTDIVKKQTNDQDAVTKEKE
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHCCCCCHHHHHHHHH
AVEKKEQQLKESEQKLEQKQQELQNNQQQQQTLISDLHTKVAKVDSEIEGLEESKGILEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQAIQKAIEEEKRAEEARKAEEARKAEEARKQAATSAQTAQAAPTPHDTNIGGFIKPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC
GSKTSGFGVRSIDNHKGIDIAASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTY
CCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEHHHHHCCCCCEEEEEEECCCCEE
TTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGEWNVGKTNAVDPSPY
EEEEEEHHCCCCCCCCHHHHCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCC
IGL
CCC
>Mature Secondary Structure
MKKKFVAFSVLAAGTIFASPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEK
CCCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
EIQELQKKIDDLTTSINKNEAELNDTKKEISKTQQVITEKKKHIEQLQTNIDTRQEVIKQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLQSMQEKPRTNIITEVLTNSANIADLVDNMYSVSLILNNDTDIVKKQTNDQDAVTKEKE
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCHHHHHCCCCCHHHHHHHHH
AVEKKEQQLKESEQKLEQKQQELQNNQQQQQTLISDLHTKVAKVDSEIEGLEESKGILEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQAIQKAIEEEKRAEEARKAEEARKAEEARKQAATSAQTAQAAPTPHDTNIGGFIKPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC
GSKTSGFGVRSIDNHKGIDIAASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTY
CCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEHHHHHCCCCCEEEEEEECCCCEE
TTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGEWNVGKTNAVDPSPY
EEEEEEHHCCCCCCCCHHHHCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCC
IGL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]