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The map label for this gene is ylbB [H]

Identifier: 222094475

GI number: 222094475

Start: 801463

End: 801882

Strand: Direct

Name: ylbB [H]

Synonym: BCQ_0813

Alternate gene names: 222094475

Gene position: 801463-801882 (Clockwise)

Preceding gene: 222094473

Following gene: 222094476

Centisome position: 15.37

GC content: 38.33

Gene sequence:

>420_bases
ATGACACGAGTGAGAGACTTGATGAGCACTCATATTGTACAGTGTACACCGTTAGACAATGTATATGAAGCTGCTGTAAA
GATGAAAGAAGAATCGATTGGATTGATCCCGGTTGTTGAAAATGAACAAGTTGTTGGTCTTGTTACGGACCGAGATTTAG
TTGTTCGAGGGATTGCTGAAAAACATCCTGGATCTAATAAAATTACAAATGTAATGACAAAAAACATTGTTTCAGTTTCT
CCAGATGATCCTATTGAAAAGGCTACAGAGTTAATGGCACAGTATCAAATTAGACGATTGCCAGTAGTTGAGAGTGGTCA
ACTCGTTGGGATGTTAGCACTAGGAGATTTAGCTATAAAAGAATCGGCAGATGATCAAGCGGGATTTGCTTTAAGTGAAA
TATCAGAGCATACGGAATGA

Upstream 100 bases:

>100_bases
TTTTTATTGTGCGTTCATTCTCCTTTATCAACTGATTTTCCTGAAATAAATAAAGGGATTTAGGAAAAGCTATGGTATGT
ATAAAAAGGAGGAGATACAA

Downstream 100 bases:

>100_bases
AGTGAGACTTTAATTAGTGTAATACGTTACGTATAAAAATCAGATACATTATTCTAGTATATAGGGTTAAGCTAATATGT
TAGCATGATGTATCTGAGCC

Product: cbs domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTKNIVSVS
PDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDLAIKESADDQAGFALSEISEHTE

Sequences:

>Translated_139_residues
MTRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTKNIVSVS
PDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDLAIKESADDQAGFALSEISEHTE
>Mature_138_residues
TRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTKNIVSVSP
DDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDLAIKESADDQAGFALSEISEHTE

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15199; Mature: 15067

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAE
CCHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCHHHHHHHHH
KHPGSNKITNVMTKNIVSVSPDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDLAIK
CCCCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCHHC
ESADDQAGFALSEISEHTE
CCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQVVGLVTDRDLVVRGIAE
CHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCHHHHHHHHH
KHPGSNKITNVMTKNIVSVSPDDPIEKATELMAQYQIRRLPVVESGQLVGMLALGDLAIK
CCCCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCHHC
ESADDQAGFALSEISEHTE
CCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]