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The map label for this gene is ygzD [H]

Identifier: 222094450

GI number: 222094450

Start: 768015

End: 768215

Strand: Direct

Name: ygzD [H]

Synonym: BCQ_0764

Alternate gene names: 222094450

Gene position: 768015-768215 (Clockwise)

Preceding gene: 222094449

Following gene: 222094451

Centisome position: 14.73

GC content: 33.83

Gene sequence:

>201_bases
ATGGCTGTAAGTAAAATAAAAGTCGCGCGTGTTCAGTTAGATTTAACACAGCAACAATTAGCAGAAAAAGTAGGCGTTAC
AAGGCAAACGATTAGTTTAATTGAGAAGGGCAAATACAATCCGTCTTTAGATTTATGTTTGAAAATTTGTTATGCAGTAG
ATAAAACTTTGAATGATTTGTTTTGGGAGGAAAAGGAGTGA

Upstream 100 bases:

>100_bases
CCCGTTCATGCGGGGTAAAGTGAAACTATAATCAGTAACGCAAAATATAAATTACTTAATGGAATATATATGTTACAATA
TAGATGGAGGGGGAACATGA

Downstream 100 bases:

>100_bases
TTCGATGAAAATTGTGAAAGATGAACGTTTAATGATTGAGGGGTTAAAACATATTAGATTAGTTTTCATCTTACAAAATA
TTTTCATACTAGGTATTGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDLFWEEKE

Sequences:

>Translated_66_residues
MAVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDLFWEEKE
>Mature_65_residues
AVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDLFWEEKE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7555; Mature: 7424

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDL
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FWEEKE
CCCCCC
>Mature Secondary Structure 
AVSKIKVARVQLDLTQQQLAEKVGVTRQTISLIEKGKYNPSLDLCLKICYAVDKTLNDL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
FWEEKE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]