Click here to switch to the map view.

The map label for this gene is rocE [H]

Identifier: 222094397

GI number: 222094397

Start: 709704

End: 711125

Strand: Direct

Name: rocE [H]

Synonym: BCQ_0711

Alternate gene names: 222094397

Gene position: 709704-711125 (Clockwise)

Preceding gene: 222094396

Following gene: 222094398

Centisome position: 13.61

GC content: 37.27

Gene sequence:

>1422_bases
ATGCAGCAACCAACGAATGAGAAATTACATCGTACGATGAAGAGTAGACATTTATTTATGATCGCACTAGGTGGTGTAAT
CGGAACTGGTTTTTTCTTAGGTTCAGGTTACACCATTAATCAGGCTGGACCAGGGGGAGCCATCCTTTCATATTTAGTAG
GCGGATTTATTATGTATTTAACAATGCTTTGTCTTGGAGAGTTAACGGTAGCGATGCCAGTTTCAGGTTCTTTCCAAAAG
TATGCGACGAAGTTTATTGGACCAGGAACGGGCTTTATGATCGGCTGGCTATATTGGCTTGGCTGGGCAGTAACAGTAGG
ATTAGAATTAACGTCAATCGGTTTAATGATGAAAAGATGGTTTCCGAATGTTGATGTTTGGGTATGGTGTCTCGTATTCG
GTGTTATTTTATATGCTTCAAACGCAATTTCGGCGAAAAGTTATGCTGAATTAGAATTTTGGTTCTCTAGTATTAAAGTA
GTTACCATTCTTGCCTTTGTTGTTCTTGGTGGTAGTGCATTATTAGGATTTATATCATATGACGGAAAAGAAGCAGCACC
TCTTTTCTCTAACTTTGTAAGCGAAGGCGGGTTATTCCCGAATGGACTAGCTGCCGTATTACTTACAATGATTACAGTTA
ACTTCTCGTTCCAAGGAACAGAGTTAATCGGGATTGCAGCGGGAGAAAGTGAAAATCCAGAAAAAACAATTCCACGTGCA
ATCCGTAATACAGTATGGCGCATTATGTTATTCTTCATTTTAACAATGACGATTTTAGTAGGATTAATTTCTTGGAAAGA
AGCTGGCGTAATTGAAAGTCCGTTCGTAGTTGTATTTGATAAAATCGGTATTCCATACGCAGCTGATATTATGAACTTCG
TTATTATTACAGCGTTACTATCTGTAGCGAATTCAGGATTATATGCGGCAACTCGTATACTATGGTCACTTGCAAATGAA
GGAATGGCACCAAAGTCTTTCCAGAAAGTAAATAAGCGTGGTATTCCAATTACAGCGCTAGTCGTAACAATTGCTGTAGC
TGCTTTATCTTTATTAACAAGTTTCCTTGCAGAAGATACAGTATACATGTACTTATTATCTATAGCTGGTTTATCAGCTG
TTTCAAGTTGGATCATTATTGCCCTGTCGCAATTGCGCTTTAGAAGTCAGTATATAAAAGGCGGAGGAAAGTTAGAGGAC
TTAAAATATAGAACACCGTTATATCCAATTGTTCCTATTTTAGCTTTAATTACAAATAGTATCGTCGTTATTAGTTTAGC
GTTTATTCCAGAACAAAGAATGGCGTTATATTGTGGTATTCCATTTATCATTTTCTGCTACATATATTATTATATAAATA
AGAAACGGCAGAAACCGATGAAGGTGGAGACAACAAATGAAACTAACCATCAAACAAGATGA

Upstream 100 bases:

>100_bases
AGTTTTAATTTTATATAGAAAATGTAATCGCTTTCGTGTATATTTTTATTATCAGAAAATTTTAACAAGATATAGGGGTA
TTGGTAGGGGGAGGATTTAG

Downstream 100 bases:

>100_bases
TATTGAGGCAGATTTATCGTATGGTCAATTAGCGATTGGAAAAGAAAACGGGTATTCACCGTTACAATTACTCGTTTCTT
CTATCGCAGGATGCAGTGCA

Product: amino acid ABC transporter permease; arginine permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MQQPTNEKLHRTMKSRHLFMIALGGVIGTGFFLGSGYTINQAGPGGAILSYLVGGFIMYLTMLCLGELTVAMPVSGSFQK
YATKFIGPGTGFMIGWLYWLGWAVTVGLELTSIGLMMKRWFPNVDVWVWCLVFGVILYASNAISAKSYAELEFWFSSIKV
VTILAFVVLGGSALLGFISYDGKEAAPLFSNFVSEGGLFPNGLAAVLLTMITVNFSFQGTELIGIAAGESENPEKTIPRA
IRNTVWRIMLFFILTMTILVGLISWKEAGVIESPFVVVFDKIGIPYAADIMNFVIITALLSVANSGLYAATRILWSLANE
GMAPKSFQKVNKRGIPITALVVTIAVAALSLLTSFLAEDTVYMYLLSIAGLSAVSSWIIIALSQLRFRSQYIKGGGKLED
LKYRTPLYPIVPILALITNSIVVISLAFIPEQRMALYCGIPFIIFCYIYYYINKKRQKPMKVETTNETNHQTR

Sequences:

>Translated_473_residues
MQQPTNEKLHRTMKSRHLFMIALGGVIGTGFFLGSGYTINQAGPGGAILSYLVGGFIMYLTMLCLGELTVAMPVSGSFQK
YATKFIGPGTGFMIGWLYWLGWAVTVGLELTSIGLMMKRWFPNVDVWVWCLVFGVILYASNAISAKSYAELEFWFSSIKV
VTILAFVVLGGSALLGFISYDGKEAAPLFSNFVSEGGLFPNGLAAVLLTMITVNFSFQGTELIGIAAGESENPEKTIPRA
IRNTVWRIMLFFILTMTILVGLISWKEAGVIESPFVVVFDKIGIPYAADIMNFVIITALLSVANSGLYAATRILWSLANE
GMAPKSFQKVNKRGIPITALVVTIAVAALSLLTSFLAEDTVYMYLLSIAGLSAVSSWIIIALSQLRFRSQYIKGGGKLED
LKYRTPLYPIVPILALITNSIVVISLAFIPEQRMALYCGIPFIIFCYIYYYINKKRQKPMKVETTNETNHQTR
>Mature_473_residues
MQQPTNEKLHRTMKSRHLFMIALGGVIGTGFFLGSGYTINQAGPGGAILSYLVGGFIMYLTMLCLGELTVAMPVSGSFQK
YATKFIGPGTGFMIGWLYWLGWAVTVGLELTSIGLMMKRWFPNVDVWVWCLVFGVILYASNAISAKSYAELEFWFSSIKV
VTILAFVVLGGSALLGFISYDGKEAAPLFSNFVSEGGLFPNGLAAVLLTMITVNFSFQGTELIGIAAGESENPEKTIPRA
IRNTVWRIMLFFILTMTILVGLISWKEAGVIESPFVVVFDKIGIPYAADIMNFVIITALLSVANSGLYAATRILWSLANE
GMAPKSFQKVNKRGIPITALVVTIAVAALSLLTSFLAEDTVYMYLLSIAGLSAVSSWIIIALSQLRFRSQYIKGGGKLED
LKYRTPLYPIVPILALITNSIVVISLAFIPEQRMALYCGIPFIIFCYIYYYINKKRQKPMKVETTNETNHQTR

Specific function: Putative transport protein involved in arginine degradative pathway. Probably transports arginine or ornithine [H]

COG id: COG0833

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]

Homologues:

Organism=Homo sapiens, GI110347453, Length=353, Percent_Identity=25.7790368271955, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI71999149, Length=350, Percent_Identity=23.4285714285714, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI258645169, Length=424, Percent_Identity=23.1132075471698, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI258614003, Length=424, Percent_Identity=22.1698113207547, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI258614005, Length=424, Percent_Identity=22.1698113207547, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081708, Length=462, Percent_Identity=50.4329004329004, Blast_Score=496, Evalue=1e-141,
Organism=Escherichia coli, GI1788480, Length=479, Percent_Identity=41.3361169102296, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1786302, Length=461, Percent_Identity=36.4425162689805, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI1786789, Length=455, Percent_Identity=36.9230769230769, Blast_Score=305, Evalue=5e-84,
Organism=Escherichia coli, GI1789017, Length=434, Percent_Identity=36.1751152073733, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI48994972, Length=463, Percent_Identity=33.6933045356371, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI87081915, Length=406, Percent_Identity=37.4384236453202, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1786602, Length=457, Percent_Identity=35.6673960612691, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1790653, Length=464, Percent_Identity=32.9741379310345, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI87081869, Length=239, Percent_Identity=25.5230125523013, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI2367353, Length=325, Percent_Identity=25.2307692307692, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17532491, Length=427, Percent_Identity=22.0140515222482, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17531343, Length=441, Percent_Identity=24.7165532879819, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17540018, Length=367, Percent_Identity=25.0681198910082, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17533459, Length=422, Percent_Identity=23.2227488151659, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6320772, Length=440, Percent_Identity=33.4090909090909, Blast_Score=256, Evalue=6e-69,
Organism=Saccharomyces cerevisiae, GI6324061, Length=421, Percent_Identity=33.9667458432304, Blast_Score=253, Evalue=4e-68,
Organism=Saccharomyces cerevisiae, GI6320717, Length=486, Percent_Identity=30.4526748971193, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6324553, Length=405, Percent_Identity=31.358024691358, Blast_Score=226, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6324059, Length=440, Percent_Identity=31.5909090909091, Blast_Score=223, Evalue=8e-59,
Organism=Saccharomyces cerevisiae, GI6319824, Length=490, Percent_Identity=30, Blast_Score=214, Evalue=3e-56,
Organism=Saccharomyces cerevisiae, GI6320251, Length=421, Percent_Identity=31.8289786223278, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6324990, Length=473, Percent_Identity=29.5983086680761, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6319542, Length=415, Percent_Identity=32.0481927710843, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322892, Length=472, Percent_Identity=30.7203389830508, Blast_Score=207, Evalue=3e-54,
Organism=Saccharomyces cerevisiae, GI6321629, Length=417, Percent_Identity=29.9760191846523, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6319543, Length=420, Percent_Identity=30, Blast_Score=206, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6322967, Length=483, Percent_Identity=29.399585921325, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6321053, Length=417, Percent_Identity=26.8585131894484, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6324924, Length=451, Percent_Identity=29.2682926829268, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6324981, Length=494, Percent_Identity=28.3400809716599, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6319608, Length=439, Percent_Identity=25.9681093394077, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6320364, Length=505, Percent_Identity=22.970297029703, Blast_Score=114, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24667468, Length=416, Percent_Identity=25.2403846153846, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI221512776, Length=438, Percent_Identity=21.0045662100457, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24666159, Length=438, Percent_Identity=21.0045662100457, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52055; Mature: 52055

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPTNEKLHRTMKSRHLFMIALGGVIGTGFFLGSGYTINQAGPGGAILSYLVGGFIMYL
CCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHH
TMLCLGELTVAMPVSGSFQKYATKFIGPGTGFMIGWLYWLGWAVTVGLELTSIGLMMKRW
HHHHHHHHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPNVDVWVWCLVFGVILYASNAISAKSYAELEFWFSSIKVVTILAFVVLGGSALLGFISY
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
DGKEAAPLFSNFVSEGGLFPNGLAAVLLTMITVNFSFQGTELIGIAAGESENPEKTIPRA
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
IRNTVWRIMLFFILTMTILVGLISWKEAGVIESPFVVVFDKIGIPYAADIMNFVIITALL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
SVANSGLYAATRILWSLANEGMAPKSFQKVNKRGIPITALVVTIAVAALSLLTSFLAEDT
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VYMYLLSIAGLSAVSSWIIIALSQLRFRSQYIKGGGKLEDLKYRTPLYPIVPILALITNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
IVVISLAFIPEQRMALYCGIPFIIFCYIYYYINKKRQKPMKVETTNETNHQTR
HHEEHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MQQPTNEKLHRTMKSRHLFMIALGGVIGTGFFLGSGYTINQAGPGGAILSYLVGGFIMYL
CCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHH
TMLCLGELTVAMPVSGSFQKYATKFIGPGTGFMIGWLYWLGWAVTVGLELTSIGLMMKRW
HHHHHHHHHEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPNVDVWVWCLVFGVILYASNAISAKSYAELEFWFSSIKVVTILAFVVLGGSALLGFISY
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
DGKEAAPLFSNFVSEGGLFPNGLAAVLLTMITVNFSFQGTELIGIAAGESENPEKTIPRA
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
IRNTVWRIMLFFILTMTILVGLISWKEAGVIESPFVVVFDKIGIPYAADIMNFVIITALL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
SVANSGLYAATRILWSLANEGMAPKSFQKVNKRGIPITALVVTIAVAALSLLTSFLAEDT
HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VYMYLLSIAGLSAVSSWIIIALSQLRFRSQYIKGGGKLEDLKYRTPLYPIVPILALITNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
IVVISLAFIPEQRMALYCGIPFIIFCYIYYYINKKRQKPMKVETTNETNHQTR
HHEEHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7540694; 9384377 [H]