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The map label for this gene is ydfK [H]

Identifier: 221635923

GI number: 221635923

Start: 510252

End: 510989

Strand: Reverse

Name: ydfK [H]

Synonym: trd_A0517

Alternate gene names: 221635923

Gene position: 510989-510252 (Counterclockwise)

Preceding gene: 221635924

Following gene: 221635917

Centisome position: 55.68

GC content: 62.47

Gene sequence:

>738_bases
GTGGATTTCTGGTCACGCACCAGCGGCACATGGATCAACGCCACGACAGTCGCAGTCGGAACCGCTTTCGGTCTCCTTCT
CCACGGTCGCTTGCCGGAACGAATGCAACGAATCGCTGTCCAAGGTGTCGGCCTCACGACCGTCTTCATCGCGCTCTCCA
TGGCAGGGAGTCTCGGAAAGGCAACGGTCGGGCGTTTCGATGGTGTGGTACTCGGACTGGTGACACTCGTGCTGGGTGGA
CTGCTCGGCGAGTGGTGGCGCGTCGAGGAGGGACTCGAAACGCTAGGAAACTGGATCAAACGACGTGTGGGTGGTGGCGG
TTCCTTCACCGAAGGATTCGTTGCCGCGAGCCTGCTCTTCTGCGTGGGACCGATGACGCTGATCGGCTCGCTCAACAATG
GCCTGACCGGTGACGCGACACTGCTGGTCATCAAGGCGACTTTGGATGGGATCTCCAGTGTCGCACTCGCCAGTGCTTAT
GGGGTCGGCGTCGGGTTCTCCATCCTTGTGATCCTCCTGTATCAGGGAGGCGTCTCGCTCGCCGCTGGTGCCCTGGCCCA
AATGCTCCCTGATCCGGCCAACGACCCTCGCATCCTCCTGGTGACCGGCGTCGGCGGCGTCATGATGATCGGGATCGCCA
TCAACTTGCTCGGCTTGGGGCGAGTACGCGTGGCCTCGTTCCTGCCCGCGCTCGTGCTGGGTCCATTCGTCTCCGCGCTC
GCTCGCTGGTTGAGCTGA

Upstream 100 bases:

>100_bases
CTCACCCTGCCGGTATCGCACGGCAGGGAGTGGCAGATCACTGAAGCGCAAAGAAGAGGGTTAGTACGGTCAACAGAATA
ATGGGGCGGTGATGGAGTTC

Downstream 100 bases:

>100_bases
CCGTACGCCCGTAGCTCCCTCAGGAGTCGACGTACACGGTGACAGTCGCGAGAGCCACCCACGGTTCGGTACCGTAGTCT
CCCGGAGTGGCGAGTGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDFWSRTSGTWINATTVAVGTAFGLLLHGRLPERMQRIAVQGVGLTTVFIALSMAGSLGKATVGRFDGVVLGLVTLVLGG
LLGEWWRVEEGLETLGNWIKRRVGGGGSFTEGFVAASLLFCVGPMTLIGSLNNGLTGDATLLVIKATLDGISSVALASAY
GVGVGFSILVILLYQGGVSLAAGALAQMLPDPANDPRILLVTGVGGVMMIGIAINLLGLGRVRVASFLPALVLGPFVSAL
ARWLS

Sequences:

>Translated_245_residues
MDFWSRTSGTWINATTVAVGTAFGLLLHGRLPERMQRIAVQGVGLTTVFIALSMAGSLGKATVGRFDGVVLGLVTLVLGG
LLGEWWRVEEGLETLGNWIKRRVGGGGSFTEGFVAASLLFCVGPMTLIGSLNNGLTGDATLLVIKATLDGISSVALASAY
GVGVGFSILVILLYQGGVSLAAGALAQMLPDPANDPRILLVTGVGGVMMIGIAINLLGLGRVRVASFLPALVLGPFVSAL
ARWLS
>Mature_245_residues
MDFWSRTSGTWINATTVAVGTAFGLLLHGRLPERMQRIAVQGVGLTTVFIALSMAGSLGKATVGRFDGVVLGLVTLVLGG
LLGEWWRVEEGLETLGNWIKRRVGGGGSFTEGFVAASLLFCVGPMTLIGSLNNGLTGDATLLVIKATLDGISSVALASAY
GVGVGFSILVILLYQGGVSLAAGALAQMLPDPANDPRILLVTGVGGVMMIGIAINLLGLGRVRVASFLPALVLGPFVSAL
ARWLS

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=182, Percent_Identity=30.7692307692308, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 25222; Mature: 25222

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFWSRTSGTWINATTVAVGTAFGLLLHGRLPERMQRIAVQGVGLTTVFIALSMAGSLGK
CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
ATVGRFDGVVLGLVTLVLGGLLGEWWRVEEGLETLGNWIKRRVGGGGSFTEGFVAASLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
CVGPMTLIGSLNNGLTGDATLLVIKATLDGISSVALASAYGVGVGFSILVILLYQGGVSL
HHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
AAGALAQMLPDPANDPRILLVTGVGGVMMIGIAINLLGLGRVRVASFLPALVLGPFVSAL
HHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ARWLS
HHHCC
>Mature Secondary Structure
MDFWSRTSGTWINATTVAVGTAFGLLLHGRLPERMQRIAVQGVGLTTVFIALSMAGSLGK
CCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCH
ATVGRFDGVVLGLVTLVLGGLLGEWWRVEEGLETLGNWIKRRVGGGGSFTEGFVAASLLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
CVGPMTLIGSLNNGLTGDATLLVIKATLDGISSVALASAYGVGVGFSILVILLYQGGVSL
HHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
AAGALAQMLPDPANDPRILLVTGVGGVMMIGIAINLLGLGRVRVASFLPALVLGPFVSAL
HHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ARWLS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]