Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is yieF [H]

Identifier: 221633740

GI number: 221633740

Start: 1771342

End: 1771902

Strand: Reverse

Name: yieF [H]

Synonym: trd_1767

Alternate gene names: 221633740

Gene position: 1771902-1771342 (Counterclockwise)

Preceding gene: 221633743

Following gene: 221633737

Centisome position: 88.46

GC content: 63.1

Gene sequence:

>561_bases
GTGACCGAACGCGTGCTCCGGATACTCGGAATTCCAGGAAGCTTGCGGCGCGAGTCCTACAACCGCGGCCTCTTGCTGGC
CGCTCAAGAACTCGCCCCACCCGGTGTCGAACTCGAGCTGTACGAGGTACGCGAGCTTCCGCTCTATGACGAGGATCTCG
AGCGAACTGGCCCGCCTGATCAGGTTCTTCACTTCAAGCAGGCCATCGCGCGCGCCGATGCGCTCTTGATCGCTACTCCC
GAGTACAACTGGAGCGTACCCGGGCCGCTCAAGAACGCGATCGACTGGGCTTCTCGTCCACCGGCAACGAGTCCCTTGCG
TCGCAAACCGGTCGCTCTGATGGGTGCCTCCACGGGTATCTCCGGAACCATCCGGGCGCAACTTGCACTCCGCCAGATCT
TCGCGTCGACCGAGTCGTATGTGCTCCCGAAGCCCGATCTTTTCGTCCGGGAGGCGGCCACGCTCTTCCGTGACGGCCGT
CTGGTCGATCGAGAAACGCGCGAGCGGATCCGGCAGTTACTCGAGGCACTCGTGGCTTGGACACTCCGCTTCCGCGATTG
A

Upstream 100 bases:

>100_bases
GAACAAAGCCCTTTGCGCACAATCGATATTCGTTCTCGAGGGACGACCTGTGTCCTTTGGCCGGTACAGGTCTGAGGTCG
GTGAAGAGAAGGGAGGTTAC

Downstream 100 bases:

>100_bases
GAGCAGCGCTTCCCGGATCACGCTACGGTGCGATGCTCTCGTCACACTCCGTCATCGTGATGGCTCTGCGGTGCTCGGCC
TCTCGCTCGTGCAATCTGCG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTERVLRILGIPGSLRRESYNRGLLLAAQELAPPGVELELYEVRELPLYDEDLERTGPPDQVLHFKQAIARADALLIATP
EYNWSVPGPLKNAIDWASRPPATSPLRRKPVALMGASTGISGTIRAQLALRQIFASTESYVLPKPDLFVREAATLFRDGR
LVDRETRERIRQLLEALVAWTLRFRD

Sequences:

>Translated_186_residues
MTERVLRILGIPGSLRRESYNRGLLLAAQELAPPGVELELYEVRELPLYDEDLERTGPPDQVLHFKQAIARADALLIATP
EYNWSVPGPLKNAIDWASRPPATSPLRRKPVALMGASTGISGTIRAQLALRQIFASTESYVLPKPDLFVREAATLFRDGR
LVDRETRERIRQLLEALVAWTLRFRD
>Mature_185_residues
TERVLRILGIPGSLRRESYNRGLLLAAQELAPPGVELELYEVRELPLYDEDLERTGPPDQVLHFKQAIARADALLIATPE
YNWSVPGPLKNAIDWASRPPATSPLRRKPVALMGASTGISGTIRAQLALRQIFASTESYVLPKPDLFVREAATLFRDGRL
VDRETRERIRQLLEALVAWTLRFRD

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family [H]

Homologues:

Organism=Escherichia coli, GI1790149, Length=189, Percent_Identity=35.978835978836, Blast_Score=109, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 20982; Mature: 20851

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERVLRILGIPGSLRRESYNRGLLLAAQELAPPGVELELYEVRELPLYDEDLERTGPPD
CCHHHHHHHCCCCHHHHHCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCCHHHCCCCHH
QVLHFKQAIARADALLIATPEYNWSVPGPLKNAIDWASRPPATSPLRRKPVALMGASTGI
HHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
SGTIRAQLALRQIFASTESYVLPKPDLFVREAATLFRDGRLVDRETRERIRQLLEALVAW
CHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TLRFRD
HHHCCC
>Mature Secondary Structure 
TERVLRILGIPGSLRRESYNRGLLLAAQELAPPGVELELYEVRELPLYDEDLERTGPPD
CHHHHHHHCCCCHHHHHCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCCHHHCCCCHH
QVLHFKQAIARADALLIATPEYNWSVPGPLKNAIDWASRPPATSPLRRKPVALMGASTGI
HHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC
SGTIRAQLALRQIFASTESYVLPKPDLFVREAATLFRDGRLVDRETRERIRQLLEALVAW
CHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
TLRFRD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]