Click here to switch to the map view.

The map label for this gene is prkB [H]

Identifier: 22127829

GI number: 22127829

Start: 4418286

End: 4419191

Strand: Reverse

Name: prkB [H]

Synonym: y3959

Alternate gene names: 22127829

Gene position: 4419191-4418286 (Counterclockwise)

Preceding gene: 22127830

Following gene: 22127826

Centisome position: 96.05

GC content: 49.89

Gene sequence:

>906_bases
GTGCCGCCACTGCAACCCCATGGAGTTAGCGCTAATATGTCAACTAAACATCCGGTTATCGCCGTCACTGGCTCAAGTGG
TGCGGGTACGACCACCACCAGTCTGGCTTTTCGCAAAATTTTTCAGCAGTTAGATATTCGCGCAGCACAGATTGAAGGTG
ACAGTTTCCATCGCTATACCCGCCCAGAAATGGATGCCGCCATTCGTAAGGCGCGGGATCAAGGCAGACATATCAGCTAT
TTTGGCCCAGAAGCGAATGATTTTGGTCAGTTAGAACAAAGCGTGGCGGAATACAGCAAACACGGTACTGGCCGCTCGCG
TAAGTATTTACATACCTATGATGAAGCAGTGCCTTATAACCAAATCCCTGGCACCTTTACTCCTTGGGAGCCGCTACCGG
AACCCACGGATGTTTTATTCTATGAAGGGCTGCATGGCGGGGTCGTGACCGAGCATCATGATGTTGCAAAACATGTGGAT
CTGTTGGTCGGTGTGGTGCCTATTGTCAATTTGGAGTGGATTCAAAAATTAGTGCGGGATACCGGTGAGCGCGGCCATTC
CCGTGAGGCGGTGATGGATTCCGTGGTGCGGTCAATGGACGATTACATTAACTACATTACGCCGCAGTTTTCACGCACCC
ACATTAACTTTCAGCGTGTTCCCACCGTTGATACCTCGAACCCATTTGCCGCCAAAGCTATTCCCTCGTTAGACGAAAGT
TTCGTTGTGATCCATTTCCGTGGTTTGGATCACATCGATTTCCCTTATTTGCTGGCGATGTTACAGGGTTCATTTATTTC
CAACATCAATACGTTAGTGGTACCCGGAGGGAAGATGGGGCTGGCGATGGAGTTAATTATGGCTCCGCTGGTTCAGCAAC
TGCTGGAAGGGAAGCAGATCGCTTAA

Upstream 100 bases:

>100_bases
CACCACGGCACTGAGTGAACAGCACAATAAAACAAGATGACAAGCCCGTCTCTTTGCCCTAAAAATAACCACTAACAACA
AAAAGAATAGGCAATGGTCA

Downstream 100 bases:

>100_bases
CTAATAATAAACTTCGGTTTTTTCTCCAACTAATCCCGTGTTTGACGAAGTGTTTGGCCGTTGATGCTCATTTAAAATAC
TCATTTTTAAGTGGCATCAG

Product: phosphoribulokinase 1

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MPPLQPHGVSANMSTKHPVIAVTGSSGAGTTTTSLAFRKIFQQLDIRAAQIEGDSFHRYTRPEMDAAIRKARDQGRHISY
FGPEANDFGQLEQSVAEYSKHGTGRSRKYLHTYDEAVPYNQIPGTFTPWEPLPEPTDVLFYEGLHGGVVTEHHDVAKHVD
LLVGVVPIVNLEWIQKLVRDTGERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFAAKAIPSLDES
FVVIHFRGLDHIDFPYLLAMLQGSFISNINTLVVPGGKMGLAMELIMAPLVQQLLEGKQIA

Sequences:

>Translated_301_residues
MPPLQPHGVSANMSTKHPVIAVTGSSGAGTTTTSLAFRKIFQQLDIRAAQIEGDSFHRYTRPEMDAAIRKARDQGRHISY
FGPEANDFGQLEQSVAEYSKHGTGRSRKYLHTYDEAVPYNQIPGTFTPWEPLPEPTDVLFYEGLHGGVVTEHHDVAKHVD
LLVGVVPIVNLEWIQKLVRDTGERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFAAKAIPSLDES
FVVIHFRGLDHIDFPYLLAMLQGSFISNINTLVVPGGKMGLAMELIMAPLVQQLLEGKQIA
>Mature_300_residues
PPLQPHGVSANMSTKHPVIAVTGSSGAGTTTTSLAFRKIFQQLDIRAAQIEGDSFHRYTRPEMDAAIRKARDQGRHISYF
GPEANDFGQLEQSVAEYSKHGTGRSRKYLHTYDEAVPYNQIPGTFTPWEPLPEPTDVLFYEGLHGGVVTEHHDVAKHVDL
LVGVVPIVNLEWIQKLVRDTGERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFAAKAIPSLDESF
VVIHFRGLDHIDFPYLLAMLQGSFISNINTLVVPGGKMGLAMELIMAPLVQQLLEGKQIA

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=288, Percent_Identity=86.4583333333333, Blast_Score=526, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 33489; Mature: 33358

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00567 PHOSPHORIBULOKINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLQPHGVSANMSTKHPVIAVTGSSGAGTTTTSLAFRKIFQQLDIRAAQIEGDSFHRYT
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
RPEMDAAIRKARDQGRHISYFGPEANDFGQLEQSVAEYSKHGTGRSRKYLHTYDEAVPYN
CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
QIPGTFTPWEPLPEPTDVLFYEGLHGGVVTEHHDVAKHVDLLVGVVPIVNLEWIQKLVRD
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TGERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFAAKAIPSLDES
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCHHHHCCCCCCC
FVVIHFRGLDHIDFPYLLAMLQGSFISNINTLVVPGGKMGLAMELIMAPLVQQLLEGKQI
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
A
C
>Mature Secondary Structure 
PPLQPHGVSANMSTKHPVIAVTGSSGAGTTTTSLAFRKIFQQLDIRAAQIEGDSFHRYT
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCC
RPEMDAAIRKARDQGRHISYFGPEANDFGQLEQSVAEYSKHGTGRSRKYLHTYDEAVPYN
CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCC
QIPGTFTPWEPLPEPTDVLFYEGLHGGVVTEHHDVAKHVDLLVGVVPIVNLEWIQKLVRD
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TGERGHSREAVMDSVVRSMDDYINYITPQFSRTHINFQRVPTVDTSNPFAAKAIPSLDES
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCHHHHCCCCCCC
FVVIHFRGLDHIDFPYLLAMLQGSFISNINTLVVPGGKMGLAMELIMAPLVQQLLEGKQI
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]