| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22127801
Identifier: 22127801
GI number: 22127801
Start: 4386661
End: 4387050
Strand: Reverse
Name: 22127801
Synonym: y3931
Alternate gene names: NA
Gene position: 4387050-4386661 (Counterclockwise)
Preceding gene: 22127806
Following gene: 22127796
Centisome position: 95.36
GC content: 41.79
Gene sequence:
>390_bases GTGACTGGCCCCCCGCTGCGGGTACGCGGTAATGAGGCATTACTGGATGAGGCATTATTTGGTGAGATATTACTTGATGA GACATTATTTGATAAGACACTGTTTGATGAAGTGCTATTTGATGAAGCACTGTTTGATAACTTGCTGTCTGATAAATGGC TATTGGAGGAGCGGCTGTGTGATGGCACGCCCATGAGTAAGAGACACCCAATTAATAAGCTAATCAACCCTCTAGAGCGA TTTAAGTGTTTATTTTTGCCAGGAAAATATACCAAATTGAAGTTCGTCAGATTGCACCACCAAGTGCTAAACTGCTTACC TGCAGCGGGTATAAAAATAGTCATCAGCTTACTTCCTTTTAATGCTGATCATCATCAGACAATCCATTGA
Upstream 100 bases:
>100_bases GAGATTGCCGCCCACACCGGTAGTCGTGATCAGATTAAGTTGCCGATAGTCAGCCAGAGCCTGCAAGATGACGGAGACCG GCGCATCCTGAAATTCCAGG
Downstream 100 bases:
>100_bases ATTCATTGTTGAAACAGTGAGAACGTTACCGATAATCCAGAACAAGGCGTCTCAGGATTTTCATACTGAAAATCGACCCA CTGGGCGCTTATCTGCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTGPPLRVRGNEALLDEALFGEILLDETLFDKTLFDEVLFDEALFDNLLSDKWLLEERLCDGTPMSKRHPINKLINPLER FKCLFLPGKYTKLKFVRLHHQVLNCLPAAGIKIVISLLPFNADHHQTIH
Sequences:
>Translated_129_residues MTGPPLRVRGNEALLDEALFGEILLDETLFDKTLFDEVLFDEALFDNLLSDKWLLEERLCDGTPMSKRHPINKLINPLER FKCLFLPGKYTKLKFVRLHHQVLNCLPAAGIKIVISLLPFNADHHQTIH >Mature_128_residues TGPPLRVRGNEALLDEALFGEILLDETLFDKTLFDEVLFDEALFDNLLSDKWLLEERLCDGTPMSKRHPINKLINPLERF KCLFLPGKYTKLKFVRLHHQVLNCLPAAGIKIVISLLPFNADHHQTIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14847; Mature: 14715
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPPLRVRGNEALLDEALFGEILLDETLFDKTLFDEVLFDEALFDNLLSDKWLLEERLC CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC DGTPMSKRHPINKLINPLERFKCLFLPGKYTKLKFVRLHHQVLNCLPAAGIKIVISLLPF CCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC NADHHQTIH CCCCCCCCC >Mature Secondary Structure TGPPLRVRGNEALLDEALFGEILLDETLFDKTLFDEVLFDEALFDNLLSDKWLLEERLC CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC DGTPMSKRHPINKLINPLERFKCLFLPGKYTKLKFVRLHHQVLNCLPAAGIKIVISLLPF CCCCCCCCCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC NADHHQTIH CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA