| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yegM [C]
Identifier: 22127631
GI number: 22127631
Start: 4181359
End: 4182357
Strand: Reverse
Name: yegM [C]
Synonym: y3760
Alternate gene names: 22127631
Gene position: 4182357-4181359 (Counterclockwise)
Preceding gene: 22127632
Following gene: 22127630
Centisome position: 90.91
GC content: 51.15
Gene sequence:
>999_bases GTGCGCCCAGTAAAAATCTTTATGGTGGAAGACAGCGGGCAAAATGGTACCCGTTATTTCCCGGCCAGGCTGCAAGCGGG TGATGAAACCCAACTCTCCTTTAAACGGGGTGGGCAACTGCAAGAGTTGTTGGTCCGTGAAGGGGAACAAGTGAAGAAAG GGCAAAAAATTGCCATGTTGAACGATACTGATTTGAGCTTAAGAGTCAGGGATCGTCAATCAACCTTCAATTTGGCCCGC GATCAGTTTAATCGCTTTAACACCTTGCAAGGCCGCAGCGCCGTCTCGCGTGCCGATCTGGATATTCGCCGTGCAGAGAT GGAGTCAGCGCAAGCGGCTTTAGACATTGCGCGTAAAGAGCTCAGCGATGCGACAATTATCGCACCTTTCGATGGCATCA TTGCCAATGTGAATGTACGTAATCACCAAGTTATGGCCGCTGGTCAGCCGGTTGCCACCTTGAGTGCGCTGGATACGTTG GATGTGGTATTCAGTGTTCCAGAGCGTCTGTTTACCACGCTGGACATCAGCAACCGTAACTACAAGCCAACGGTATTACT GAACCATATGCCAGGGCGTGAGTTTATTGCTGAATATAAAGAACACACCACTTCGACGACCTCTGCTTCACAGACTTTCC AGGTCACGCTGACGATGAAACGCCCAGCAGATATGCCATTGCTTTCCGGTATCAGTGGCCGGGTCAGAATTAACTCCGGC AATTTGTCTGGCACCGACCATCCAACCATCATCGTTCCGGTGGAAGCCGTATTTAACCCCGACCATGCGCAGTTGAATGA TGCCCGAGTGTGGGTCATTAAGAATGATAATGACCAAATGCACGTAGAAGAACGCAAAGTGCAGGTGGGGCAACTCGTGG AAAACGGTATTCAAGTGACCTCTGGCCTGGCTGATGGCGAACAAATTGTTGCCGCAGGTACCGGTGAGCTTCGCCCACAA CAAGTTGTCCGGGCTTGGGTTCGTGAGCGAGGTCTCTAA
Upstream 100 bases:
>100_bases TCAACGAGATCTTACAGTGAAGATAAAAACAGTAGTCACTCTGCTCATTACGTTCCTTCTCGCCGCCTGCGACAGAACGC CTCCTGAAACCGTCGAAAGT
Downstream 100 bases:
>100_bases TGAAGCTGACTGATAATTTTATCAATAATAATACCCGTATCTGGCTAACGATTCTGTTGCTAGGTATTGGTGGCATTATT GCCTATCTCAATATAGGCAG
Product: multidrug resistance protein
Products: NA
Alternate protein names: Efflux Transporter RND Family MFP Subunit; Membrane-Fusion Protein; Secretion Protein HlyD; Multidrug Resistance Protein; RND Efflux Membrane Fusion Protein; HlyD Family Secretion Protein; Transport/Efflux Transmembrane Protein; Periplasmic Linker Protein; Acriflavin Resistance Periplasmic Protein; Auxiliary Transport Protein MFP Family; Efflux Protein; RND Efflux System Membrane Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; Lipoprotein; Acriflavin Resistance Protein E; Efflux Transporter; Multidrug Efflux Transporter Protein; Component Of Multidrug Efflux System; Periplasmic Linker Protein Multidrug Resistance Protein; RND Efflux Membrane Fusion Protein-Related Protein; Component Of Multidrug Efflux Protein; AcrA/E Family Efflux Transporter MFP Subunit; RND Family Multidrug Transporter Membrane Fusion Protein; Efflux Transporter RND Family; Efflux Transporter Component; Linker Protein; RND Membrane Fusion Protein; Secretion Protein HlyD Family; HlyD Family Efflux Transporter Component; Multidrug RND Transporter Membrane Fusion Protein; Acriflavine Resistance Protein E; Secretion Protein; Cation/Multidrug Efflux System Mebrane-Fusion Component; Efflux System Protein; Multidrug ABC Transporter; RND Superfamily Transport Protein Membrane-Fusion Protein; Periplasmic Component Of Efflux System; Efflux Transmembrane Protein; RND Family Resistance-Nodulation- Efflux Pump; Acriflavin Resistance Protein AcrE; Organic Solvent Efflux Pump; Cation Efflux System Protein; Membrane Fusion Protein; RND/Acr Family Transmembrane Transporter
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVKKGQKIAMLNDTDLSLRVRDRQSTFNLAR DQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDGIIANVNVRNHQVMAAGQPVATLSALDTL DVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQTFQVTLTMKRPADMPLLSGISGRVRINSG NLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQLVENGIQVTSGLADGEQIVAAGTGELRPQ QVVRAWVRERGL
Sequences:
>Translated_332_residues MRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVKKGQKIAMLNDTDLSLRVRDRQSTFNLAR DQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDGIIANVNVRNHQVMAAGQPVATLSALDTL DVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQTFQVTLTMKRPADMPLLSGISGRVRINSG NLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQLVENGIQVTSGLADGEQIVAAGTGELRPQ QVVRAWVRERGL >Mature_332_residues MRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVKKGQKIAMLNDTDLSLRVRDRQSTFNLAR DQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKELSDATIIAPFDGIIANVNVRNHQVMAAGQPVATLSALDTL DVVFSVPERLFTTLDISNRNYKPTVLLNHMPGREFIAEYKEHTTSTTSASQTFQVTLTMKRPADMPLLSGISGRVRINSG NLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQLVENGIQVTSGLADGEQIVAAGTGELRPQ QVVRAWVRERGL
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36870; Mature: 36870
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVKKGQKIAML CCCEEEEEEECCCCCCCEEEEEEECCCCCCEEHHHCCCHHHHHHHHCCHHHHCCCEEEEE NDTDLSLRVRDRQSTFNLARDQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKE ECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH LSDATIIAPFDGIIANVNVRNHQVMAAGQPVATLSALDTLDVVFSVPERLFTTLDISNRN CCCCEEEEECCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCHHHHEEEEEECCCC YKPTVLLNHMPGREFIAEYKEHTTSTTSASQTFQVTLTMKRPADMPLLSGISGRVRINSG CCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHCCCCCEEEEECC NLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQLVENGIQVT CCCCCCCCEEEEEEHHEECCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCEEE SGLADGEQIVAAGTGELRPQQVVRAWVRERGL CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRPVKIFMVEDSGQNGTRYFPARLQAGDETQLSFKRGGQLQELLVREGEQVKKGQKIAML CCCEEEEEEECCCCCCCEEEEEEECCCCCCEEHHHCCCHHHHHHHHCCHHHHCCCEEEEE NDTDLSLRVRDRQSTFNLARDQFNRFNTLQGRSAVSRADLDIRRAEMESAQAALDIARKE ECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHH LSDATIIAPFDGIIANVNVRNHQVMAAGQPVATLSALDTLDVVFSVPERLFTTLDISNRN CCCCEEEEECCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCHHHHEEEEEECCCC YKPTVLLNHMPGREFIAEYKEHTTSTTSASQTFQVTLTMKRPADMPLLSGISGRVRINSG CCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCHHHCCCCCEEEEECC NLSGTDHPTIIVPVEAVFNPDHAQLNDARVWVIKNDNDQMHVEERKVQVGQLVENGIQVT CCCCCCCCEEEEEEHHEECCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHCCCEEE SGLADGEQIVAAGTGELRPQQVVRAWVRERGL CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA