| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yjjZ [H]
Identifier: 22127626
GI number: 22127626
Start: 4173398
End: 4173724
Strand: Reverse
Name: yjjZ [H]
Synonym: y3754
Alternate gene names: 22127626
Gene position: 4173724-4173398 (Counterclockwise)
Preceding gene: 22127628
Following gene: 22127625
Centisome position: 90.72
GC content: 51.07
Gene sequence:
>327_bases TTGGTTATGATTATCATTATCATTTGGGTGGGCATCATCATGATTACATCGACACTTGCAGCTTACCGTTCGTGGGGGAT CACCGGGTTGCTCAGCCGTGGCATGTCCAGTGGCTGGGGAATATTGCTGCCTTTTACCTTGTTACCTGTACTGGGCTGGG TAGATATCTCTATCGGCCAATTGCGCATTCTTATTGTCGTGGCGATGCTGGCAACCGTCAGCATGTTGTACCACGTGCGG TTGCGGCACTTTTTGTTACTGCCATCTTGTCTGGCGCTGTTAGGCGGCTTGGTCGCGCTAATGCTAATGCACGGTGGTGT GTCATGA
Upstream 100 bases:
>100_bases GCCTGTCATCATGATGTCGTTCAACGGCGCAAAATGATGCATATGACGCGAGCGTGCAGATAACGACATGGTGCAGAGTG CCAAAGAGTGATATATGATA
Downstream 100 bases:
>100_bases TGGGGGTATCCGATCATCGGGGATAATATAAAACGTGAGGTAATACAGTAAGTAACAGCTTGGATGATTGACGTTGAAAT GGAGACGTATGTATATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVMIIIIIWVGIIMITSTLAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSMLYHVR LRHFLLLPSCLALLGGLVALMLMHGGVS
Sequences:
>Translated_108_residues MVMIIIIIWVGIIMITSTLAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSMLYHVR LRHFLLLPSCLALLGGLVALMLMHGGVS >Mature_108_residues MVMIIIIIWVGIIMITSTLAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSMLYHVR LRHFLLLPSCLALLGGLVALMLMHGGVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082437, Length=75, Percent_Identity=49.3333333333333, Blast_Score=68, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009885 - ProDom: PD058594 [H]
Pfam domain/function: PF07256 DUF1435 [H]
EC number: NA
Molecular weight: Translated: 11729; Mature: 11729
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMIIIIIWVGIIMITSTLAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQ CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH LRILIVVAMLATVSMLYHVRLRHFLLLPSCLALLGGLVALMLMHGGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVMIIIIIWVGIIMITSTLAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQ CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHH LRILIVVAMLATVSMLYHVRLRHFLLLPSCLALLGGLVALMLMHGGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]