Click here to switch to the map view.

The map label for this gene is osmY [H]

Identifier: 22127619

GI number: 22127619

Start: 4168195

End: 4168809

Strand: Reverse

Name: osmY [H]

Synonym: y3748

Alternate gene names: 22127619

Gene position: 4168809-4168195 (Counterclockwise)

Preceding gene: 22127620

Following gene: 22127618

Centisome position: 90.61

GC content: 44.55

Gene sequence:

>615_bases
ATGAAGAGCACACAATTTTCCCGTTCAGTGATGGCGGTTGTTTTAGGTTCTGCCCTTATTAGTGGCAGTGTTCTGGCCGA
AGACACGCTACTGAATAAAGCCGCCAGCACAGTGGACAGTACTGGTGCCAAAATCGATAGCTCCATGAAGAAAGTTGATA
ATTACATGAGCGATAGCGCAGTCACGGCGAAAGTAAAAAGCGCTTTATTGGAAGAAAAATCACTTAAAAGCACCGATATT
TCTGTCGAAACGAGCAATGGCGTCGTGACACTGAGTGGTTTTCTTAATTCTCAGGCCGAAATTGAAACCGCGGTTGAAAT
TGCCGGTAACGTTGAAGGGGTTAAATCTGTCAGCGACAAATTGCACGTAAAAGACCAGAAATCACAGTCGGTCAGTGAAT
ATGCGGGCGATGCTGCGACCACCAGCAGTGTTAAAGCAAAATTACTGGCAGATGATATCGTACCATCACGTAAAATTAAG
GTAGAAACGACCGATGGTGTCGTACAGCTATCGGGTGATGTTGAGAATAAAGCCCAATCTGAACGTGCAGAAAGTATTGC
TAAAGCGGTAAACGGCGTGAAAAGCGTTAAAAACGACTTGAACATCAAGCCTTAA

Upstream 100 bases:

>100_bases
ACTATTCGTGAAAAGGTCACCGCCTTAAGGTGGTGTAAGGATCCTCTTGTTGGGGTTTCATAACCCATGAAAGGATTCAT
AACAAAAAAGGAAGACATCG

Downstream 100 bases:

>100_bases
TCATTATTCAGCTGGCGACGTATGGCATGGAATCTATCCTGTTGGATATCGATAAATAAGGTATCCCCCCAAGCCGTTCG
TCAACTGAGTTAATTTCCTC

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKSTQFSRSVMAVVLGSALISGSVLAEDTLLNKAASTVDSTGAKIDSSMKKVDNYMSDSAVTAKVKSALLEEKSLKSTDI
SVETSNGVVTLSGFLNSQAEIETAVEIAGNVEGVKSVSDKLHVKDQKSQSVSEYAGDAATTSSVKAKLLADDIVPSRKIK
VETTDGVVQLSGDVENKAQSERAESIAKAVNGVKSVKNDLNIKP

Sequences:

>Translated_204_residues
MKSTQFSRSVMAVVLGSALISGSVLAEDTLLNKAASTVDSTGAKIDSSMKKVDNYMSDSAVTAKVKSALLEEKSLKSTDI
SVETSNGVVTLSGFLNSQAEIETAVEIAGNVEGVKSVSDKLHVKDQKSQSVSEYAGDAATTSSVKAKLLADDIVPSRKIK
VETTDGVVQLSGDVENKAQSERAESIAKAVNGVKSVKNDLNIKP
>Mature_204_residues
MKSTQFSRSVMAVVLGSALISGSVLAEDTLLNKAASTVDSTGAKIDSSMKKVDNYMSDSAVTAKVKSALLEEKSLKSTDI
SVETSNGVVTLSGFLNSQAEIETAVEIAGNVEGVKSVSDKLHVKDQKSQSVSEYAGDAATTSSVKAKLLADDIVPSRKIK
VETTDGVVQLSGDVENKAQSERAESIAKAVNGVKSVKNDLNIKP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1790836, Length=203, Percent_Identity=64.0394088669951, Blast_Score=242, Evalue=1e-65,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 21296; Mature: 21296

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTQFSRSVMAVVLGSALISGSVLAEDTLLNKAASTVDSTGAKIDSSMKKVDNYMSDSA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
VTAKVKSALLEEKSLKSTDISVETSNGVVTLSGFLNSQAEIETAVEIAGNVEGVKSVSDK
HHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHH
LHVKDQKSQSVSEYAGDAATTSSVKAKLLADDIVPSRKIKVETTDGVVQLSGDVENKAQS
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHH
ERAESIAKAVNGVKSVKNDLNIKP
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKSTQFSRSVMAVVLGSALISGSVLAEDTLLNKAASTVDSTGAKIDSSMKKVDNYMSDSA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH
VTAKVKSALLEEKSLKSTDISVETSNGVVTLSGFLNSQAEIETAVEIAGNVEGVKSVSDK
HHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHH
LHVKDQKSQSVSEYAGDAATTSSVKAKLLADDIVPSRKIKVETTDGVVQLSGDVENKAQS
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHH
ERAESIAKAVNGVKSVKNDLNIKP
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]