Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127608
Identifier: 22127608
GI number: 22127608
Start: 4152635
End: 4153816
Strand: Reverse
Name: 22127608
Synonym: y3735
Alternate gene names: NA
Gene position: 4153816-4152635 (Counterclockwise)
Preceding gene: 22127609
Following gene: 161484740
Centisome position: 90.29
GC content: 45.18
Gene sequence:
>1182_bases ATGAGCCGAATAATGAGGCTAATCGGCTCACTCTCCGGTTGGGAGATCACTATGGGTGAAAATATTTGGGTATGGCAGCA AAAGAAATGGCCCAATTTTTATTGGGATGAGGCGCTTATTCAGCCACAGTTGCGTCATGCCAGATTTAAACTCGGGCAAC TCCTTGGCGAGAACCGGACGAATACCTCGGCAGAAAACGCGACCAAAACATTAGATATATTATTGGCAAATATTATTGCT TCATCAAAAATCGAAAATGAACCACTGAATATAAGATCGGTACGGTCATCTCTGGCGAAGCGGCTGGGTATGATTTTAGA GGATAATTATCCAACGTCAGATCGAACCGATGGTTTGGCCGCTATGATGCTGGACGCCATTAATGAGTGTAAGGCAGATT TAACACTTGAGCGGTTGTATCAATGGCATGAATGGCTTTTTCCTAATGATTTATGGTCGCTCACCCCGATGAAGGCTGGC CAATTACGGGGGCAGGAGCCTATGCAAGTTGTTTCAGGCCGTATAGGGAAAGAAACCGTTCATTTTGAAGCACCGCCGCA AGCAATCCTGTTTGATGAAATAGAGCAATTCATCAGTTGGTTTAATTTATCCCGCAGCGATAGCTTTCTTGACCCGCTGT TACGCGCTGCAATTGTACATTTTTGGTTTGTCACTTTGCACCCCTTTGAGGATGGTAACGGGCGCATCACTCGGGCGCTT ACTGATATGGCATTATCACAGGCAGATAGTCAAAGTATTCACCTTTATGCGATGTCAGTAGCGATCCTTGATAATCGAGA AGCGTATTACGCCATTTTGGAACAGGGGCAACGTGGCAATCTGGATATCACTCCATGGTTGTTATGGTTTATTGCCACTT TGGAGCAGAGTCTGGATCAGGCTTCAAAAGGTATTGAACATACTTTAGCTAAAACCTCTTTTTGGTTAAAACATAATGGC AGTGGATTGAGTGCGGAACAGGTAAAAGTGCTTAATCGCCTATTAGATGGCGGTGAGAATGGCTTTTCTGCTGGGATAAA TGCGTCACAATATCAGAAAGTCGCAAAGGTCAGTAAAGCAACCGCCACGCGTCATCTTGCTGATTTACTGGCACGTGAAT GTATTGAAAAACTGCCGGGCGGTGGACGAAGCACGCGGTATCAGGCGAAATACCCTGACTAA
Upstream 100 bases:
>100_bases GTTTTCCTGAGTATCAGTGGGGGGAGTTGAGCATCTGATCACTCTCTACGTGCTGGATATCATCACATGAGCCGAATATA CTGGCTATTCGGCTCACCAA
Downstream 100 bases:
>100_bases AAAGGCCTGCGATTGCAGGCCCTTCTATCTGTCAGGCTACTATCCGTCAGACTTCTACCCGCCAGCCACTTACTGATGTA AATGGCTGGGAATGTACTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Homolog; Filamentation Induced By CAMP Protein Family Protein; Transcription Regulator; -Like Protein; AsnC Family Regulatory Protein
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSRIMRLIGSLSGWEITMGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLANIIA SSKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAG QLRGQEPMQVVSGRIGKETVHFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRAL TDMALSQADSQSIHLYAMSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLKHNG SGLSAEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEKLPGGGRSTRYQAKYPD
Sequences:
>Translated_393_residues MSRIMRLIGSLSGWEITMGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLANIIA SSKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAG QLRGQEPMQVVSGRIGKETVHFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRAL TDMALSQADSQSIHLYAMSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLKHNG SGLSAEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEKLPGGGRSTRYQAKYPD >Mature_392_residues SRIMRLIGSLSGWEITMGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLANIIAS SKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAGQ LRGQEPMQVVSGRIGKETVHFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRALT DMALSQADSQSIHLYAMSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLKHNGS GLSAEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEKLPGGGRSTRYQAKYPD
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44506; Mature: 44375
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIMRLIGSLSGWEITMGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRT CHHHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NTSAENATKTLDILLANIIASSKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCCCCCCHHH AMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGKETV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEE HFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRAL EECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH TDMALSQADSQSIHLYAMSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQ HHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ASKGIEHTLAKTSFWLKHNGSGLSAEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKA HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TATRHLADLLARECIEKLPGGGRSTRYQAKYPD HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCC >Mature Secondary Structure SRIMRLIGSLSGWEITMGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRT HHHHHHHHCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NTSAENATKTLDILLANIIASSKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCCCCCCHHH AMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGKETV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEE HFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRAL EECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH TDMALSQADSQSIHLYAMSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQ HHHHHHHCCCCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ASKGIEHTLAKTSFWLKHNGSGLSAEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKA HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TATRHLADLLARECIEKLPGGGRSTRYQAKYPD HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA