Click here to switch to the map view.

The map label for this gene is 22127539

Identifier: 22127539

GI number: 22127539

Start: 4071466

End: 4073685

Strand: Reverse

Name: 22127539

Synonym: y3665

Alternate gene names: NA

Gene position: 4073685-4071466 (Counterclockwise)

Preceding gene: 22127540

Following gene: 22127538

Centisome position: 88.54

GC content: 49.68

Gene sequence:

>2220_bases
ATGCGCATCATTCGCCCGCAACAGCTCGTGGTCTTGAAAAGCAGTTACCAGATAGGCCATGAAAGCCATATGGGGATCAG
CGTCGTTGCTGGCTGTTATCTCTCTAAACCTGAGCATATGGTGACGGAGTCACAGATCTGGCAGGCATGGAAAGCGGCAC
CGCTCTCTTTCCGCATGTTGGACAGTGCTGAGCCAAAACCCTTTGCTGAGTTTTTGCTGGCCGGTCATGCCGGTATTGGT
GAAGAGGTTACCTCGCTGAGTGCAGAGGTTAGTGTTGGCTCACTGACCCGGCGCTGGTGTATTGAGGGCGAAAGCAACAA
AACGGGTCTGGTCATTAAACCTTTCTTACGTATGTCGATGGACCATACGCAAAGTTGGGGGGGCAAAGGCTGTAAGGAGA
ATCCACTGGGACGTGGGTATAACGATGAGCGCAAACCGACGATTATGTCTTTAGGCCTTGACGGCTCTGCTATCGTTCGC
TCACCGCTGGCGTCTCCGTCACCTGTGCCTCATGACTTCCAACTGCGTAAAGTGCATATCAATGAAGTCGCCTCGACCAT
GACCGATCCTCAATATCTGGAAACATTTTATCCCGGTTTGCCACCGCAAATTGATCGTCGCTATTTCCAAATGGCTCCGC
CAGGGCAGTGGCTGAAGAAAAGTGCATGGCCTGATAGCGTACCGTTCAAACTCATCGGTTTTCGCCCGGACAATGAGGAG
ATCAGCGGTGCGTTTCCTGCGGTCAGTGCAAGGGCGTTTGTTTGGGATAACCCTTCAGCGCCCCCCAGTGAGGTGACCTT
ACTGCGGAAAACACTGTGGCTGTTACCGGATAACGATATGGGGCTAATGGTGTTTACCGGCAGCGTGCCACTGACTCACC
TTTTTGATGAGCCTATCGATACGTTGCTGGTGGGATTGGATGACTCCCATTCGCTACGTGAGTTGGAATATTACCAACAG
GTCTATAAAAGTCGCAGCGTTGAAGGTGCTGCGAGTTTTGAATTCCTCAAAGATCCGGAACTGATGCCAGAGGGGATGCC
GCTGAACGTCATCCGGGATTTGGCGGATCACCCAGACTCGCTGCGTTATAGCGCTTCCGCCATGTCTGAAGCGGAGTCCG
AACGTTTCTATCAGGATGTTCAGGATGCTATCGATCGGCAGGAACAGCAGAAGAGTGAAGAACAAGAGACGCTGGGTGAT
TTGAATGTCCCCGCAGCCGGCAAAGAGGAAGCGGGAACCCAATGGTTGGAAAGCAAAGAAGATACGGCAACCAACGTCAC
ATTTTTAGGGACTGACTTCTCTGGAATGACCTTGGACAACAAGCAATTCCGCTATTGCATGTTTACCGGTTGCCATTTTG
ACAAGGCGACATTTAAAGACTGCACCTTCGAGCATTGCCAGTTTACGCAAAGTGATTTTGAAAACTCCCGTTGGAACAAT
GTGCATTTAAGTGGCTGTTTATTCAAACAGGCAGAGTGGCAAAAAGCCGCCTTTACCCACTGTAAATGGGAGAAATCCAC
CTTTGAGTATGGGGTGTTTAAACACGCTCAGTTTACCGACAATGCGTTAGATAACTGCCTGATTAACCATAGTGATTTCA
GCCTTGGCACGTTTGATCATTGTACGCTGAATGGCTGTTTCTTCTCCGAAACACATTGTGATCAAACACAATTTAATCAG
GTCATCATCACGTCGTGCATATTCGAAAAATGCGACGGCCCGAAGGCTTGCTTTACCGAAAGCACGATAGAGAAAACCTC
GTTTATTAGCAGCAGTTGGGTGGGGGGGCGCTTGAGTCATTGCTATCTCAATAGCTTGACCACGGGCCTGAATACCAATC
TCTCTGAGTCGCATTTTGAGCAGTGCAGCCTGAATAAAATGGGCTTCCTCAAGGTCAATTTACAATCCAGTACCTTTATT
AATTGCTCGATGTTGGAGAGTTGCTGCGATAAGGCTGATTTCTCTCAGGCGACGCTGATTGCCTGTGATATGACCGCGGT
ACGGTTAAAAGATGCCAACTTAGTCCATAGCCACTGGCAGAACACCAGCTTACAGCAAAGCATGTTTTACAACGCTGACT
TACGTGATGCCACTTTCCAGCGTTGCAATCTGGCGGGCGCTAATCTGGCGATGATCAGCCAAAACATGGACACCCGATTT
GAACATTGTTTGACGGAAAAGACGCACTGGATCCCGCGTCGTTACACCGTCCCTGCATAA

Upstream 100 bases:

>100_bases
CACGGGATTATCCGTCAGTTATACCGGCGCTCAATATTCCGATGTGGGTGTCGATCTGAAAACCGTTGGCATGCAAAGCA
AAAACTGAAAAGGAAGCATT

Downstream 100 bases:

>100_bases
ATATCACGTTTCAAAGGAGCATGGAATGACACCGTCCGACACCCCTATTATGCCTCCCGACAGTCCACGTCGGATTATTG
GCCGGCACTTTACACAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Pentapeptide Repeat-Containing Protein; Secreted Protein; Pentapeptide Repeats Family Protein; Exported Protein

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG
EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR
SPLASPSPVPHDFQLRKVHINEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE
ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQ
VYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGD
LNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN
VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQ
VIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFI
NCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF
EHCLTEKTHWIPRRYTVPA

Sequences:

>Translated_739_residues
MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG
EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR
SPLASPSPVPHDFQLRKVHINEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE
ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQ
VYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGD
LNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN
VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQ
VIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFI
NCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF
EHCLTEKTHWIPRRYTVPA
>Mature_739_residues
MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRMLDSAEPKPFAEFLLAGHAGIG
EEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSMDHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVR
SPLASPSPVPHDFQLRKVHINEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE
ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPIDTLLVGLDDSHSLRELEYYQQ
VYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDSLRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGD
LNVPAAGKEEAGTQWLESKEDTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN
VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDHCTLNGCFFSETHCDQTQFNQ
VIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFI
NCSMLESCCDKADFSQATLIACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF
EHCLTEKTHWIPRRYTVPA

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83340; Mature: 83340

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRML
CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEC
DSAEPKPFAEFLLAGHAGIGEEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSM
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCEEEHHHHHHHH
DHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVRSPLASPSPVPHDFQLRKVHI
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEH
NEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE
HHHHHHCCCHHHHHHHCCCCCCHHHHHHEECCCCHHHHHHCCCCCCCCEEEEEECCCCCC
ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPID
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHCCHH
TLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDS
HEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCH
LRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHCCC
DTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN
CCCCEEEEEECCCCCCEECCCCEEEEEEECCCCCCCHHCCCCHHHHHCCHHHHCCCCCCE
VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDH
EEEEEEEECHHHHHHHHHHHCCCCCCCHHHCCEECCCCCHHHHHHHEECCCCCCCCCCCC
CTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSH
EEECCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCHHH
CYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLI
HHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEE
ACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF
EECCEEEEEECCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHH
EHCLTEKTHWIPRRYTVPA
HHHHHHHHCCCCCCEECCC
>Mature Secondary Structure
MRIIRPQQLVVLKSSYQIGHESHMGISVVAGCYLSKPEHMVTESQIWQAWKAAPLSFRML
CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEC
DSAEPKPFAEFLLAGHAGIGEEVTSLSAEVSVGSLTRRWCIEGESNKTGLVIKPFLRMSM
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHEECCCCCCCCEEEHHHHHHHH
DHTQSWGGKGCKENPLGRGYNDERKPTIMSLGLDGSAIVRSPLASPSPVPHDFQLRKVHI
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEH
NEVASTMTDPQYLETFYPGLPPQIDRRYFQMAPPGQWLKKSAWPDSVPFKLIGFRPDNEE
HHHHHHCCCHHHHHHHCCCCCCHHHHHHEECCCCHHHHHHCCCCCCCCEEEEEECCCCCC
ISGAFPAVSARAFVWDNPSAPPSEVTLLRKTLWLLPDNDMGLMVFTGSVPLTHLFDEPID
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHCCHH
TLLVGLDDSHSLRELEYYQQVYKSRSVEGAASFEFLKDPELMPEGMPLNVIRDLADHPDS
HEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCH
LRYSASAMSEAESERFYQDVQDAIDRQEQQKSEEQETLGDLNVPAAGKEEAGTQWLESKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHCCC
DTATNVTFLGTDFSGMTLDNKQFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNN
CCCCEEEEEECCCCCCEECCCCEEEEEEECCCCCCCHHCCCCHHHHHCCHHHHCCCCCCE
VHLSGCLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNCLINHSDFSLGTFDH
EEEEEEEECHHHHHHHHHHHCCCCCCCHHHCCEECCCCCHHHHHHHEECCCCCCCCCCCC
CTLNGCFFSETHCDQTQFNQVIITSCIFEKCDGPKACFTESTIEKTSFISSSWVGGRLSH
EEECCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHCCCCCCCHHH
CYLNSLTTGLNTNLSESHFEQCSLNKMGFLKVNLQSSTFINCSMLESCCDKADFSQATLI
HHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEE
ACDMTAVRLKDANLVHSHWQNTSLQQSMFYNADLRDATFQRCNLAGANLAMISQNMDTRF
EECCEEEEEECCHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCHHHHH
EHCLTEKTHWIPRRYTVPA
HHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA