Click here to switch to the map view.

The map label for this gene is ygjV [H]

Identifier: 22127471

GI number: 22127471

Start: 3992489

End: 3993019

Strand: Reverse

Name: ygjV [H]

Synonym: y3597

Alternate gene names: 22127471

Gene position: 3993019-3992489 (Counterclockwise)

Preceding gene: 22127472

Following gene: 22127464

Centisome position: 86.79

GC content: 48.4

Gene sequence:

>531_bases
ATGACCTTTTATTGGTTTGCTCAAGCCGTTGGCGTACTGGCATTTTTTGTCGGTATCACCATGTTCTTCAACCGTGATGA
GCGGCGTTTTAAACAGCAACTTTCCGTTTACAGCGCCATTATCGGCTGCCATTTCTTCCTAATGGGGGCCAGTGCTGCCG
GGAGTAGCGCGCTGCTGAATTCGTTACGTACTCTGATCTCTACCAAGACTCGCAGTAGCAGAGTGATGGTGGTATTCATC
ATCCTGACACTGGCTTTGGGTATATGGCGCATGCAACATGCCGTAGAGATATTACCGATTTTTGGCACGGTGATCAGCAC
TTGGGCGCTGTTCCGCACCAGCGGACTAACGACCCGTAGTGTGATGTGGATATCCACGGCTTGCTGGTTTATTCATAACG
TCTGGTTGGGTTCGATTGGCGGTTCATTGATTGAAGGGAGTTTCTTGCTGCTGAATGGCTTTAATATTATTCGGTTCCGT
CGTCTGCAATTGCAGGGAATAGATCCTTTTGAGATTGAGAAAAAGGCCTGA

Upstream 100 bases:

>100_bases
CACTTCCCCTTCACACTTTAAGCTGTAGGGGGAGTGCGCTGTTTGCTTATTAATTTGTAAAGACTCAGTACGGGGAACCG
TACATCAGGACCCTCCCGCC

Downstream 100 bases:

>100_bases
TTTGATAACAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCATATGCGCCTATAAGGCTCTGTTACCAGCCGCGCCCT
AACAGGCGCATCGCGATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTFYWFAQAVGVLAFFVGITMFFNRDERRFKQQLSVYSAIIGCHFFLMGASAAGSSALLNSLRTLISTKTRSSRVMVVFI
ILTLALGIWRMQHAVEILPIFGTVISTWALFRTSGLTTRSVMWISTACWFIHNVWLGSIGGSLIEGSFLLLNGFNIIRFR
RLQLQGIDPFEIEKKA

Sequences:

>Translated_176_residues
MTFYWFAQAVGVLAFFVGITMFFNRDERRFKQQLSVYSAIIGCHFFLMGASAAGSSALLNSLRTLISTKTRSSRVMVVFI
ILTLALGIWRMQHAVEILPIFGTVISTWALFRTSGLTTRSVMWISTACWFIHNVWLGSIGGSLIEGSFLLLNGFNIIRFR
RLQLQGIDPFEIEKKA
>Mature_175_residues
TFYWFAQAVGVLAFFVGITMFFNRDERRFKQQLSVYSAIIGCHFFLMGASAAGSSALLNSLRTLISTKTRSSRVMVVFII
LTLALGIWRMQHAVEILPIFGTVISTWALFRTSGLTTRSVMWISTACWFIHNVWLGSIGGSLIEGSFLLLNGFNIIRFRR
LQLQGIDPFEIEKKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789474, Length=174, Percent_Identity=65.5172413793103, Blast_Score=246, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019629 [H]

Pfam domain/function: PF10688 Imp-YgjV [H]

EC number: NA

Molecular weight: Translated: 19885; Mature: 19754

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFYWFAQAVGVLAFFVGITMFFNRDERRFKQQLSVYSAIIGCHFFLMGASAAGSSALLN
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SLRTLISTKTRSSRVMVVFIILTLALGIWRMQHAVEILPIFGTVISTWALFRTSGLTTRS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VMWISTACWFIHNVWLGSIGGSLIEGSFLLLNGFNIIRFRRLQLQGIDPFEIEKKA
HHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCHHHHHEEEHCCCCCCCCCCCCC
>Mature Secondary Structure 
TFYWFAQAVGVLAFFVGITMFFNRDERRFKQQLSVYSAIIGCHFFLMGASAAGSSALLN
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SLRTLISTKTRSSRVMVVFIILTLALGIWRMQHAVEILPIFGTVISTWALFRTSGLTTRS
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VMWISTACWFIHNVWLGSIGGSLIEGSFLLLNGFNIIRFRRLQLQGIDPFEIEKKA
HHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCHHHHHEEEHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]