Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127430
Identifier: 22127430
GI number: 22127430
Start: 3937130
End: 3937330
Strand: Direct
Name: 22127430
Synonym: y3556
Alternate gene names: NA
Gene position: 3937130-3937330 (Clockwise)
Preceding gene: 22127426
Following gene: 22127431
Centisome position: 85.58
GC content: 45.77
Gene sequence:
>201_bases GTGGAAAATAACACACTGGCTAACCTGACGCTGCTAGAGGGTCATCCTCTGGAGGATCGCCAACTCGTTACCCAGACAGA GAAAGCATTTCGGTTAATCATGAATCAAAAACATTCTGGGAAGTGTTCAGTAGCGGTTGTTTATGATGATGAACCCAGCT TTCTGGTCGGGTTTAGCGCGTTAATTGAGGCTGTTCAATGA
Upstream 100 bases:
>100_bases TGTTCTATGCTCAAGAGTGTACCCGCAGGGAGGTCACGGTGATGATGAATGTTGTCCCTTCTCTGACCCAAGAAATCCTT TCCCCAATAAATAGGGTGTC
Downstream 100 bases:
>100_bases ATAATATGACTTCTCTCAGGAAGCTGCGGTGGTTTTTCTGCACGTGTTTAACGACAGCAAAACAGGCGCTATGGCGTGGG CCATTGATCCTGTTATCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MENNTLANLTLLEGHPLEDRQLVTQTEKAFRLIMNQKHSGKCSVAVVYDDEPSFLVGFSALIEAVQ
Sequences:
>Translated_66_residues MENNTLANLTLLEGHPLEDRQLVTQTEKAFRLIMNQKHSGKCSVAVVYDDEPSFLVGFSALIEAVQ >Mature_66_residues MENNTLANLTLLEGHPLEDRQLVTQTEKAFRLIMNQKHSGKCSVAVVYDDEPSFLVGFSALIEAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7361; Mature: 7361
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNTLANLTLLEGHPLEDRQLVTQTEKAFRLIMNQKHSGKCSVAVVYDDEPSFLVGFSA CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEHHH LIEAVQ HHHHCC >Mature Secondary Structure MENNTLANLTLLEGHPLEDRQLVTQTEKAFRLIMNQKHSGKCSVAVVYDDEPSFLVGFSA CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEHHH LIEAVQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA