Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
---|---|
Accession | NC_004088 |
Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22127366
Identifier: 22127366
GI number: 22127366
Start: 3874111
End: 3874683
Strand: Direct
Name: 22127366
Synonym: y3492
Alternate gene names: NA
Gene position: 3874111-3874683 (Clockwise)
Preceding gene: 22127365
Following gene: 22127367
Centisome position: 84.21
GC content: 46.07
Gene sequence:
>573_bases TTGTTCAGGAAAAATAATACGTTAATCAATAATCAAGGTGGTGCAATTATTGTTGAATTTGCATTTGTGACTTTTATTAT TGTTCTATTTATAAAACTGCTGATTGCCATCGCTGAATATCAGTCGATTTCCGGTAAGTTAGATCGTCTTTCATATTCAG CCGCGGGTATCATTCGTGAAAGGGGGCGGTTATATCCGCATGATCCTGAATTGAATCAACAGCAAGTTGATCAACTCAGA GATCTTGTTCAGCGTGCGTTACTGAACTCGGGTGTACCTGCTGATAACCTCAGGATGCGGGTAGAGACATTACATTTTAA CCCCATCGAGCCACCAGGTTCTCGTCAGCAACAGATTGATGAGCATAAGAGCCTGTCATTCAGTACTGGCGATTGCTCCC CGGTTCAGCCACTCCGTGGGTTAGTTGCGCTGTCACCATTAAGCCAAAGTGAACGCTGGGTGCCGCTCTACCAGGTCACA ATATGCCTGCCCCCCCCTCAGAGATACCGTGACCTGATTAGTGTCAGCCCCTTGCCAACATTGAAATCATCGGCCATCAC AATCGGGCGCTAA
Upstream 100 bases:
>100_bases CTACCACTCGCCCACTATCAGGTTAGATTACATTACCAACCGATATTTTTACCTTTCCCTCAAGCATGGGTAAATACGTT ATTGTCCAGGGAGGTGATTT
Downstream 100 bases:
>100_bases ACAGCCTACGAATAAAGGTTATATATGCAGAAAAAAACAATGATAACTTTCATACTAGAGAAGTATGAGTTTTTTATTAA AAATAGACAGGGAGCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLR DLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVT ICLPPPQRYRDLISVSPLPTLKSSAITIGR
Sequences:
>Translated_190_residues MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLR DLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVT ICLPPPQRYRDLISVSPLPTLKSSAITIGR >Mature_190_residues MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLR DLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVT ICLPPPQRYRDLISVSPLPTLKSSAITIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21330; Mature: 21330
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRE CCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQID CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCCCCCHHHHHH EHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPT HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCC LKSSAITIGR CCCCCEECCC >Mature Secondary Structure MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRE CCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQID CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCCCCCHHHHHH EHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPQRYRDLISVSPLPT HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCC LKSSAITIGR CCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA