Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127360
Identifier: 22127360
GI number: 22127360
Start: 3868671
End: 3869903
Strand: Direct
Name: 22127360
Synonym: y3486
Alternate gene names: NA
Gene position: 3868671-3869903 (Clockwise)
Preceding gene: 22127359
Following gene: 22127361
Centisome position: 84.09
GC content: 33.5
Gene sequence:
>1233_bases ATGACTACCGGAATAAAAATAATGATGTTCATGGGTGTGCTGTTTATAAAAATAGACATTACGCCATTATCGAATCATGG AATAAACATTTATAATGGTGGTAGTATGCAATTAATTCTCAATAAAGATTTAATCAATAAAAAAGATAATAGGGAAAAGA GTGCTGTTGTCATTATCTCAACCCGAAAAGGGTTAAAAGATAAAATTTCCGAATATGTCCGATTGGCTGATATAAAAAAC ATCAAAGAAATAGATGATGATATTTTTAGCGCCGCCTCAATTTTGATACCGGATAATGTGAAAGGAATTATAATAGATAT AAATGAGAATCATGATATCAACACTATTCTTGATCTAATGAAAGTTCATACACCACGGGACTGTTGGTGTATATTAGTCG GTGATATTGATTCTATTAGCATCGCCCAACAATTTATTGAGCGTGGCATATTATATCTACATATCCAATCACAATTGGCC GATCTCACACAAAATTTACTAAAAGGTATCCAAATAGAGTCAGATAGAAAAGCATTTTTTATCAGTATACTGGGTTGCCG GGGAGGGATAGGCACGACATTACTCAGTTACCAACTGGCGCATGTGATCACCCAAATAAAAAAATCGCCTACCTTGTTAT TACAAGGCAATCAAGGCTCGCAAGATCTCGACTTGATCACTGAAAAAAAAATGGGCGAAGATATTACTGGTTACCAGAAA AATTTTGATCTTATGCGAGGAAACGAAAGAAAACTCAGTGAAGTTAATGAGCATAACAATAAAAAACATAACTTTATTAT TTTCGATCAACCAATTCATAATGCACGGAAAGAAAAAACACTCGATTATATCTCTAACTCAAATTGCATCATTCTGCTTA TTGACCATAGTATGATGTCCGTTCGTGTAGCGAAAGAGTTTATTGATACTCTGGAAAGGTTCAAAAGAGATAATAGACAA GCCATTAGACTATTTATTTGCCTTAACGAAAACAGGCCAATAACAAAAGATATGTTGACGACTTCTGATATCCAATCATT ATTGGGCCATTCTATTGATACCGCGATACCTTATATCAACAATGCGAAGAATTCACTGAATAGCCCTGACTATTTTGGTA GAAAGAAAACCAAGGTTGTTGAACTGGCAAAACAATCTTTAGGTATAAATATAAATTTATCCTCTCATACCAATATGTGG ATTAGGGAAAAACTCAATAAGTTATTTAAATAA
Upstream 100 bases:
>100_bases TTAATAGGTGAATATTTCACCAATAAAACTGAAAAGCATCCATTTCCTCTTAAATTAAATAACAGTCTGCCATTAGAATT AAATTGTAATTATATGAAAA
Downstream 100 bases:
>100_bases ATGAGGTTATTATGATTGTCCCTTTAAAAATACAAGAGTTAATGCGCGAAAGAATGTTAGCCAATATTGACATTAATAAA GTTGAACTCCTGGTTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Tight Adherence Protein TadZ; Tight Adherance Operon Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTTGIKIMMFMGVLFIKIDITPLSNHGINIYNGGSMQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKN IKEIDDDIFSAASILIPDNVKGIIIDINENHDINTILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLA DLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQK NFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNARKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLERFKRDNRQ AIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTAIPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMW IREKLNKLFK
Sequences:
>Translated_410_residues MTTGIKIMMFMGVLFIKIDITPLSNHGINIYNGGSMQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKN IKEIDDDIFSAASILIPDNVKGIIIDINENHDINTILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLA DLTQNLLKGIQIESDRKAFFISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQK NFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNARKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLERFKRDNRQ AIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTAIPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMW IREKLNKLFK >Mature_409_residues TTGIKIMMFMGVLFIKIDITPLSNHGINIYNGGSMQLILNKDLINKKDNREKSAVVIISTRKGLKDKISEYVRLADIKNI KEIDDDIFSAASILIPDNVKGIIIDINENHDINTILDLMKVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLAD LTQNLLKGIQIESDRKAFFISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQKN FDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNARKEKTLDYISNSNCIILLIDHSMMSVRVAKEFIDTLERFKRDNRQA IRLFICLNENRPITKDMLTTSDIQSLLGHSIDTAIPYINNAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMWI REKLNKLFK
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46679; Mature: 46548
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGIKIMMFMGVLFIKIDITPLSNHGINIYNGGSMQLILNKDLINKKDNREKSAVVIIS CCCCHHHHHHHCEEEEEEEEEECCCCCEEEEECCEEEEEEECHHCCCCCCCCCCEEEEEE TRKGLKDKISEYVRLADIKNIKEIDDDIFSAASILIPDNVKGIIIDINENHDINTILDLM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCHHHHHHHH KVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLADLTQNLLKGIQIESDRKAFF HHCCCCCEEEEEEECCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCEECCCCCEEE ISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQK EEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHH NFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNARKEKTLDYISNSNCIILLIDHSMMS CCHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHH VRVAKEFIDTLERFKRDNRQAIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTAIPYIN HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCC NAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMWIREKLNKLFK CCHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure TTGIKIMMFMGVLFIKIDITPLSNHGINIYNGGSMQLILNKDLINKKDNREKSAVVIIS CCCHHHHHHHCEEEEEEEEEECCCCCEEEEECCEEEEEEECHHCCCCCCCCCCEEEEEE TRKGLKDKISEYVRLADIKNIKEIDDDIFSAASILIPDNVKGIIIDINENHDINTILDLM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCHHHHHHHH KVHTPRDCWCILVGDIDSISIAQQFIERGILYLHIQSQLADLTQNLLKGIQIESDRKAFF HHCCCCCEEEEEEECCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCEECCCCCEEE ISILGCRGGIGTTLLSYQLAHVITQIKKSPTLLLQGNQGSQDLDLITEKKMGEDITGYQK EEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCHHH NFDLMRGNERKLSEVNEHNNKKHNFIIFDQPIHNARKEKTLDYISNSNCIILLIDHSMMS CCHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHH VRVAKEFIDTLERFKRDNRQAIRLFICLNENRPITKDMLTTSDIQSLLGHSIDTAIPYIN HHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCC NAKNSLNSPDYFGRKKTKVVELAKQSLGININLSSHTNMWIREKLNKLFK CCHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA