Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127313
Identifier: 22127313
GI number: 22127313
Start: 3824929
End: 3825957
Strand: Direct
Name: 22127313
Synonym: y3438
Alternate gene names: NA
Gene position: 3824929-3825957 (Clockwise)
Preceding gene: 22127312
Following gene: 22127317
Centisome position: 83.14
GC content: 45.97
Gene sequence:
>1029_bases ATGACTCAAGAGCTGCAATGGGCTGCTGAGGCAGGGTACAACACACTGCGGACCAATTTGCCCTTTGTTGTCTGGCAGCA TGATCCTGATGGATTAATGACTAGAGTTGAGCATTTTCTCGATATTTGCCAACGTGTTGACATCAAAGTGATGTTAACGC TAATGGATGATTGTGGCTTTTCTGGTGACCATCCTTTTATCGGGCAACAAAAACAACCTATTCCCGGTTTGCATAATAGT CAGGCTGCCGCCAGCCCTGGTCGCAATGTGGTCATGCAGCCTTATTTATGGGGACAGGTTGAACGGTATCTCAAAGAGAT TATTGGTCATTTCGCTCACGATGAACGGATCGTGATATGGGATCTCTACAACGAGCCAACCAACCGTATGATTTTCACCT TAGCGGGTGAAGACGCTTTTGATCCGGCGCTGGAAGAATATAGCCACCAGTTAATGGAAAAAGCGTTTATGTGGGCACGG GAGGTCAACCCGACACAGCCACTCACGGTGGGCGCGTGGCATATTGCTAATATTCTGGATCTCGGTGCACCTATTTATCA GCATCCGACGGATATACGTGCCTTGGAATTATCGGATATCATCTCCTTCCATGCCTATGTACCATTAGATTTAATGAACA AAGCGATTGGCCTTTTGAAAGAATATAAGCGCCCAATGCTGTGTACCGAATGGTTGGCCCGTCATGCCGAATCGAAAATG CATGAACAGTTACCTTTGTTTAACGCTGAAGGTATTGGTTGCTACCAATGGGGGTTAGTCAAAGGCGCGACTCAAACTCA TATTCCATGGCCTGAAATTAAACGTACCGATAATGACTATGCGTCCCGCTGGTTCCATGATGTTTTTAATGAGGAGGGTA CCGCTTATGCACTGAACCCCAAAACTTGGACATCTGCTTTACTGCTTTTCTACCTGAGTCCGGTATTCTGCCGGACTCAT TCCGCCTGTTTTCAGGCTAATGCGCTCTGTATTGTAATAATGGATATATTCTACAATGTCACGCTTTAA
Upstream 100 bases:
>100_bases CATAAACAGCAGGGGTGGTTGCGTGGTTTTAACTATTTACCGCGTACCGCCGTCAACTGGACTGAAATGTGGCAACAGGA TACCGTTCGATCCGGCTTGT
Downstream 100 bases:
>100_bases AACTGTGGCTGAATCGTACTTCTTACGGTGATACATCTCGGCTTTCAGGTGACTGAAGAAATTTTCCATCACTGCATTAT CTAAACAATTGCCTTTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRVEHFLDICQRVDIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNS QAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAR EVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRALELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKM HEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYALNPKTWTSALLLFYLSPVFCRTH SACFQANALCIVIMDIFYNVTL
Sequences:
>Translated_342_residues MTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRVEHFLDICQRVDIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNS QAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAR EVNPTQPLTVGAWHIANILDLGAPIYQHPTDIRALELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKM HEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYALNPKTWTSALLLFYLSPVFCRTH SACFQANALCIVIMDIFYNVTL >Mature_341_residues TQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRVEHFLDICQRVDIKVMLTLMDDCGFSGDHPFIGQQKQPIPGLHNSQ AAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIWDLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWARE VNPTQPLTVGAWHIANILDLGAPIYQHPTDIRALELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKMH EQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYALNPKTWTSALLLFYLSPVFCRTHS ACFQANALCIVIMDIFYNVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39325; Mature: 39194
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRVEHFLDICQRVDIKVMLTLMDDCGF CCCCHHHHHHCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC SGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEE DLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILD ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH LGAPIYQHPTDIRALELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKM HCCCHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYALNP HHHCCCCCCCCCCEEHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEECC KTWTSALLLFYLSPVFCRTHSACFQANALCIVIMDIFYNVTL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TQELQWAAEAGYNTLRTNLPFVVWQHDPDGLMTRVEHFLDICQRVDIKVMLTLMDDCGF CCCHHHHHHCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC SGDHPFIGQQKQPIPGLHNSQAAASPGRNVVMQPYLWGQVERYLKEIIGHFAHDERIVIW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEE DLYNEPTNRMIFTLAGEDAFDPALEEYSHQLMEKAFMWAREVNPTQPLTVGAWHIANILD ECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHH LGAPIYQHPTDIRALELSDIISFHAYVPLDLMNKAIGLLKEYKRPMLCTEWLARHAESKM HCCCHHCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH HEQLPLFNAEGIGCYQWGLVKGATQTHIPWPEIKRTDNDYASRWFHDVFNEEGTAYALNP HHHCCCCCCCCCCEEHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCCEEEECC KTWTSALLLFYLSPVFCRTHSACFQANALCIVIMDIFYNVTL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA