Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is 22127308
Identifier: 22127308
GI number: 22127308
Start: 3820440
End: 3820682
Strand: Direct
Name: 22127308
Synonym: y3433
Alternate gene names: NA
Gene position: 3820440-3820682 (Clockwise)
Preceding gene: 22127307
Following gene: 22127309
Centisome position: 83.04
GC content: 30.45
Gene sequence:
>243_bases ATGATTCGTGATAGTAAAAACTGGGCAGATGAAGTTGCTAAACGGCATATTAAACGAAAAGTGTTAGAGTTTAGATTGAA GATAGACCACAATGAATTTTTAAATGGTAATTTCTCTCAACGAGCCAATTTATTTTTGGATGCTTTACAACGCTCTATTG ATAAGATGGAAAATTTAGGTATTTCACTTGAAGATAGAAATAAATTATATGGTATTTTAGCAAGCGTAAAAAGTGAATTG TGA
Upstream 100 bases:
>100_bases GTTATATAGAGATACTAGGATTTTCATAGAGAAGCAAGTTAATAGCAATCTTGATGAAATTACGTTCGATCATGATTATG ACAAATGGGCTTTTATTGTC
Downstream 100 bases:
>100_bases TTGATTTTGTAAACCAATTGGAACTATTTAAATTAAATTTTCCAGTTGGTTAATGTCAGTTTTCGTTGATTTTTTATATT TCACAGTGTGAAAAATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MIRDSKNWADEVAKRHIKRKVLEFRLKIDHNEFLNGNFSQRANLFLDALQRSIDKMENLGISLEDRNKLYGILASVKSEL
Sequences:
>Translated_80_residues MIRDSKNWADEVAKRHIKRKVLEFRLKIDHNEFLNGNFSQRANLFLDALQRSIDKMENLGISLEDRNKLYGILASVKSEL >Mature_80_residues MIRDSKNWADEVAKRHIKRKVLEFRLKIDHNEFLNGNFSQRANLFLDALQRSIDKMENLGISLEDRNKLYGILASVKSEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9402; Mature: 9402
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDSKNWADEVAKRHIKRKVLEFRLKIDHNEFLNGNFSQRANLFLDALQRSIDKMENLG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCC ISLEDRNKLYGILASVKSEL CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIRDSKNWADEVAKRHIKRKVLEFRLKIDHNEFLNGNFSQRANLFLDALQRSIDKMENLG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCC ISLEDRNKLYGILASVKSEL CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA