Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
---|---|
Accession | NC_004088 |
Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22127271
Identifier: 22127271
GI number: 22127271
Start: 3746478
End: 3747065
Strand: Direct
Name: 22127271
Synonym: y3395
Alternate gene names: NA
Gene position: 3746478-3747065 (Clockwise)
Preceding gene: 22127269
Following gene: 22127272
Centisome position: 81.43
GC content: 47.62
Gene sequence:
>588_bases GTGAAAAAAACATTCGTGGTAACTGCCCGGCTGACAATGATAGCGTTAGCGGCCATCACCTATAGCCATATGGCCTCTGC ACAATCTTCGCCCTCTTCCTCAGTGACCGCACAACAAACTGATTTTTTGGCTCAGCAGGGTTTAGCGGGCAAGAGTGCCG AACAAATGGTCGATGCTATCGATCAGTCGCCACAAACGCGCCCGTTGCCTTATTCGGCATCGGTAACCCATACCGAACTG ATACTATCTGATGGGCAACAGAAATTTGTTTATCCGCTGGGCGATAGATTTTATTTGTCATTCGCCCCTTATATTAACCA AACACATCCTTGCTTTAACCACAGTTTATCTGGTTGCCGTGGCGAACTGGCCAATACGCCTTTTGAGGTGAAGATTACCG ATAATTCAGGCAAGGTTATTATGCACCAGCAGGTAACCAGTTATCAAAATGGCTTTATTGGCGTCTGGCTGCCACGCAAT ATTGAAGGCACCCTTGAAGTTAGCTATCAAGGCCTCACTGCGGTCTCGCCTTTTGCGACCGGTGCCGAGAGTCAAACATG TTTGACGACGTTGCAACTGCAAAAATAA
Upstream 100 bases:
>100_bases AAAAATTTACCTTTCTATTCAATTCTGCCTTTGACCTTCCCCCAGGGGGAGGGTTTAGTTTGTAGGCAATTAACACATTG ATAAAAAGGATAAAACGACA
Downstream 100 bases:
>100_bases GCGCCGAGAGTGGCCTGAGATAATAACTAATCAGGCCAATAACCCATGAGATCGATAGCCCATGAGATCGATAACCTATG AGATCGATAGCGAATCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKKTFVVTARLTMIALAAITYSHMASAQSSPSSSVTAQQTDFLAQQGLAGKSAEQMVDAIDQSPQTRPLPYSASVTHTEL ILSDGQQKFVYPLGDRFYLSFAPYINQTHPCFNHSLSGCRGELANTPFEVKITDNSGKVIMHQQVTSYQNGFIGVWLPRN IEGTLEVSYQGLTAVSPFATGAESQTCLTTLQLQK
Sequences:
>Translated_195_residues MKKTFVVTARLTMIALAAITYSHMASAQSSPSSSVTAQQTDFLAQQGLAGKSAEQMVDAIDQSPQTRPLPYSASVTHTEL ILSDGQQKFVYPLGDRFYLSFAPYINQTHPCFNHSLSGCRGELANTPFEVKITDNSGKVIMHQQVTSYQNGFIGVWLPRN IEGTLEVSYQGLTAVSPFATGAESQTCLTTLQLQK >Mature_195_residues MKKTFVVTARLTMIALAAITYSHMASAQSSPSSSVTAQQTDFLAQQGLAGKSAEQMVDAIDQSPQTRPLPYSASVTHTEL ILSDGQQKFVYPLGDRFYLSFAPYINQTHPCFNHSLSGCRGELANTPFEVKITDNSGKVIMHQQVTSYQNGFIGVWLPRN IEGTLEVSYQGLTAVSPFATGAESQTCLTTLQLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21244; Mature: 21244
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFVVTARLTMIALAAITYSHMASAQSSPSSSVTAQQTDFLAQQGLAGKSAEQMVDAI CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH DQSPQTRPLPYSASVTHTELILSDGQQKFVYPLGDRFYLSFAPYINQTHPCFNHSLSGCR HCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCHHCCCCCCC GELANTPFEVKITDNSGKVIMHQQVTSYQNGFIGVWLPRNIEGTLEVSYQGLTAVSPFAT HHHCCCCEEEEEECCCCCEEEEEEHHHHCCCEEEEEECCCCCCEEEEEECCCEEECCCCC GAESQTCLTTLQLQK CCCCCEEEEEEEECC >Mature Secondary Structure MKKTFVVTARLTMIALAAITYSHMASAQSSPSSSVTAQQTDFLAQQGLAGKSAEQMVDAI CCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH DQSPQTRPLPYSASVTHTELILSDGQQKFVYPLGDRFYLSFAPYINQTHPCFNHSLSGCR HCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCHHCCCCCCC GELANTPFEVKITDNSGKVIMHQQVTSYQNGFIGVWLPRNIEGTLEVSYQGLTAVSPFAT HHHCCCCEEEEEECCCCCEEEEEEHHHHCCCEEEEEECCCCCCEEEEEECCCEEECCCCC GAESQTCLTTLQLQK CCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA