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The map label for this gene is hcpA [H]

Identifier: 22123957

GI number: 22123957

Start: 49742

End: 50260

Strand: Reverse

Name: hcpA [H]

Synonym: y0036

Alternate gene names: 22123957

Gene position: 50260-49742 (Counterclockwise)

Preceding gene: 22123962

Following gene: 22123955

Centisome position: 1.09

GC content: 48.94

Gene sequence:

>519_bases
ATGCCAACTCCAGCTTATATCTCTATCACAGGGAAAACGCAGGGCAATATTACCGCAGGTGCTTTCACAGCTGAATCCGT
CGGTAATATCTATGTTCAAGGTCATGAAGACGAAATGTTGGTACAGGAGTTTGAGCACATTGTGACGGTGCCTACCGATC
CTCAATCCGGCCAGCCTTCCGGCCAACGTGCGCACAAACCATTGCGTTTCACTGTTGCGTACAACAAAGCCGTTCCATTG
CTGTATAACGCATTAGCCTCTGGTGAAATGCTGCCAACAGTGGAATTGAAGTGGTACCGCACCTCGATTGAAGGCAAACA
AGAGCATTTCTTCACGACTAAACTGGAAGATGCCACCATTATCGACATTGATTGTAAAATGCCGCATTGTCAGGATTCCA
CCAAGGCTGAGTTTACTCAATTAGTCCGTGTATCACTGGCATACCGCAAGATTAACTGGGATCACACCACCGCGGGCACC
TCTGGTGCTGATGACTGGCGTGCGCCGATCGAAGCGTAA

Upstream 100 bases:

>100_bases
GTGAAGTGGTGGAGCGAGTTACATTCAACGCTGACAGATATGTCCAGCAGAAGTGACTAACCTTTGATCAAAATCAAATA
AACTATCAAGGATATTAAAA

Downstream 100 bases:

>100_bases
TATTGTATTTCTTCAGCAGCCAATGAGGTTATTGGCTGCTGGTTTTTACTGATGGTTTTTAGTGTATTTAACCCGCCTGA
TATTCCTTTTATCTTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPTPAYISITGKTQGNITAGAFTAESVGNIYVQGHEDEMLVQEFEHIVTVPTDPQSGQPSGQRAHKPLRFTVAYNKAVPL
LYNALASGEMLPTVELKWYRTSIEGKQEHFFTTKLEDATIIDIDCKMPHCQDSTKAEFTQLVRVSLAYRKINWDHTTAGT
SGADDWRAPIEA

Sequences:

>Translated_172_residues
MPTPAYISITGKTQGNITAGAFTAESVGNIYVQGHEDEMLVQEFEHIVTVPTDPQSGQPSGQRAHKPLRFTVAYNKAVPL
LYNALASGEMLPTVELKWYRTSIEGKQEHFFTTKLEDATIIDIDCKMPHCQDSTKAEFTQLVRVSLAYRKINWDHTTAGT
SGADDWRAPIEA
>Mature_171_residues
PTPAYISITGKTQGNITAGAFTAESVGNIYVQGHEDEMLVQEFEHIVTVPTDPQSGQPSGQRAHKPLRFTVAYNKAVPLL
YNALASGEMLPTVELKWYRTSIEGKQEHFFTTKLEDATIIDIDCKMPHCQDSTKAEFTQLVRVSLAYRKINWDHTTAGTS
GADDWRAPIEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 19100; Mature: 18968

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPAYISITGKTQGNITAGAFTAESVGNIYVQGHEDEMLVQEFEHIVTVPTDPQSGQPS
CCCCCEEEEECCCCCCEEECEEECCCCCEEEEECCCCHHHHHHHHHEEECCCCCCCCCCC
GQRAHKPLRFTVAYNKAVPLLYNALASGEMLPTVELKWYRTSIEGKQEHFFTTKLEDATI
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCEE
IDIDCKMPHCQDSTKAEFTQLVRVSLAYRKINWDHTTAGTSGADDWRAPIEA
EEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTPAYISITGKTQGNITAGAFTAESVGNIYVQGHEDEMLVQEFEHIVTVPTDPQSGQPS
CCCCEEEEECCCCCCEEECEEECCCCCEEEEECCCCHHHHHHHHHEEECCCCCCCCCCC
GQRAHKPLRFTVAYNKAVPLLYNALASGEMLPTVELKWYRTSIEGKQEHFFTTKLEDATI
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCEE
IDIDCKMPHCQDSTKAEFTQLVRVSLAYRKINWDHTTAGTSGADDWRAPIEA
EEEECCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]