Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
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Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is 221232778
Identifier: 221232778
GI number: 221232778
Start: 2021132
End: 2022244
Strand: Reverse
Name: 221232778
Synonym: SPN23F_20870
Alternate gene names: NA
Gene position: 2022244-2021132 (Counterclockwise)
Preceding gene: 221232779
Following gene: 221232777
Centisome position: 91.04
GC content: 42.86
Gene sequence:
>1113_bases ATGAAGAAAAGAATGTTATTAGCGTCAACAGTAGCCTTGTCATTTGCCCCAGTATTGGCAACTCAAGCAGAAGAAGTTCT TTGGACTGCACGTAGTGTTGAGCAAATCCAAAACGATTTGACTAAAACGGACAACAAAACAAGTTATACCGTACAGTATG GTGATACTTTGAGCACCATTGCAGAAGCCTTGGGTGTAGATGTAACAGTGCTTGCGAATCTGAACAAAATCACTAATATG GACTTGATTTTCCCAGAAACTGTTTTGACAACGACTGTCAATGAAGCAGAAGAAGTAACAGAAGTTGAAATCCAAACACC TCAAGCAGACTCTAGTGAAGAAGTGACAACTGCGACAGCAGATTTGACCACTAATCAAGTGACCGTTGATGATCAAACTG TTCAGGTTGCAGACCTTTCTCAACCAATTGCAGAAGTTACAAAGACAGTGATTGCTTCTGAAGAAGTGGCACCATCTACG GGCACTTCTGTCCCAGAGGAGCAAACGACCGAAACAACTCGCCCAGTTGAAGAAGCAACTCCTCAGGAAACGACTCCAGC TGAGAAGCAGGAAACACAAGCAAGCCCTCAAGCTGCATCAGCAGTGGAAGTAACTACAACAAGTTCAGAAGCAAAAGAAG TAGCATCATCAAATGGAGCTACAGCAGCAGTTTCTACTTATCAACCAGAAGAGACGAAAATAATTTCAACAACTTACGAG GCTCCAGCTGCGCCCGATTATGCTGGACTTGCAGTAGCAAAATCTGAAAATGCAGGTCTTCAACCACAAACAGCTGCCTT TAAAGAAGAAATTGCTAACTTGTTTGGCATTACATCCTTTAGTGGTTATCGTCCAGGAGACAGTGGAGATCACGGAAAAG GTTTGGCTATCGACTTTATGGTACCAGAACGTTCAGAATTAGGGGATAAGATTGCGGAATATGCTATTCAAAATATGGCC AGCCGTGGCATTAGTTACATCATCTGGAAACAACGTTTCTATGCTCCATTCGATAGCAAATATGGGCCAGCTAACACTTG GAACCCAATGCCAGACCGTGGTAGTGTGACAGAAAATCACTATGATCACGTTCACGTTTCAATGAATGGATAA
Upstream 100 bases:
>100_bases CAAGGAATAGACAGTTCTGTTAAATAGGCCCGAGAGGGCTTTTTTTCTACATTTTTTGTGTTATGATAGACAGGTACTCA TTTGAAAGGAATTTGAAAGA
Downstream 100 bases:
>100_bases ACCCGACTTGATAACATCATTTTGACGAATGAGATCTAGCTTTCGTGATGGAAAGCGATTCTCGTTCGTTTTTTCTTTGT CATACTCTTCGAAAATCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Surface Antigen; Peptidase; Group B Streptococcal Surface Immunogenic Protein; Surface Immunogenic Protein Truncated; LysM Repeat-Containing Protein; Cell Wall Metabolism LysM Type Protein; SH3 Type 3 Domain-Containing Protein; Surface Immunogenic Protein
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTIAEALGVDVTVLANLNKITNM DLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATADLTTNQVTVDDQTVQVADLSQPIAEVTKTVIASEEVAPST GTSVPEEQTTETTRPVEEATPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPEETKIISTTYE APAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFMVPERSELGDKIAEYAIQNMA SRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENHYDHVHVSMNG
Sequences:
>Translated_370_residues MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTIAEALGVDVTVLANLNKITNM DLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATADLTTNQVTVDDQTVQVADLSQPIAEVTKTVIASEEVAPST GTSVPEEQTTETTRPVEEATPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPEETKIISTTYE APAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFMVPERSELGDKIAEYAIQNMA SRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENHYDHVHVSMNG >Mature_370_residues MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTIAEALGVDVTVLANLNKITNM DLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATADLTTNQVTVDDQTVQVADLSQPIAEVTKTVIASEEVAPST GTSVPEEQTTETTRPVEEATPQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPEETKIISTTYE APAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFMVPERSELGDKIAEYAIQNMA SRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENHYDHVHVSMNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39747; Mature: 39747
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH AEALGVDVTVLANLNKITNMDLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATA HHHHCCCEEEEECCHHHCCCEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEE DLTTNQVTVDDQTVQVADLSQPIAEVTKTVIASEEVAPSTGTSVPEEQTTETTRPVEEAT ECCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHCCCHHHCC PQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPEETKIISTTYE CCCCCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCEEEEEECC APAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFM CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE VPERSELGDKIAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENH CCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YDHVHVSMNG CCEEEEEECC >Mature Secondary Structure MKKRMLLASTVALSFAPVLATQAEEVLWTARSVEQIQNDLTKTDNKTSYTVQYGDTLSTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH AEALGVDVTVLANLNKITNMDLIFPETVLTTTVNEAEEVTEVEIQTPQADSSEEVTTATA HHHHCCCEEEEECCHHHCCCEEECCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEE DLTTNQVTVDDQTVQVADLSQPIAEVTKTVIASEEVAPSTGTSVPEEQTTETTRPVEEAT ECCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHCCCHHHCC PQETTPAEKQETQASPQAASAVEVTTTSSEAKEVASSNGATAAVSTYQPEETKIISTTYE CCCCCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCEEEEEECC APAAPDYAGLAVAKSENAGLQPQTAAFKEEIANLFGITSFSGYRPGDSGDHGKGLAIDFM CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEE VPERSELGDKIAEYAIQNMASRGISYIIWKQRFYAPFDSKYGPANTWNPMPDRGSVTENH CCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YDHVHVSMNG CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA