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The map label for this gene is ypaA [H]

Identifier: 221232776

GI number: 221232776

Start: 2020017

End: 2020376

Strand: Reverse

Name: ypaA [H]

Synonym: SPN23F_20840

Alternate gene names: 221232776

Gene position: 2020376-2020017 (Counterclockwise)

Preceding gene: 221232777

Following gene: 221232775

Centisome position: 90.95

GC content: 33.06

Gene sequence:

>360_bases
ATGTCAATTATTTTAACAACGATCGTTGCTTTGGAGCATTTTTACATTTTTTATTTGGAAAGTATTGCCACGCAATCAGA
TGCGACTAGTCGTGTATTTAATATGGAAAAGGAAGAATTGGCTCATCCGTCAGTAAGTTCATTGTTCAAAAATCAAGGAA
TTTATAAGGCTCTGCTAGGAGTCTTTCTCTTGTATGTCATTTATTTCTCACAGAATTTAGAAATTGTGACTATTTTTGTC
TTATTTGTGATTGGTGCTGCGACTTACGGCTCTTTAACAGCGGATAAAAAAATTATTTTGAAACAAGGTGGATCAGCTAT
TTTGGCCTTGATTAGTATTTTACTCTTTAAATACACTTGA

Upstream 100 bases:

>100_bases
ATAGAAAGTATCTTAACAGAGTTTGAGAGAACAGAACTCAGCCGTTTATTAAATAAATTGGTTTTGGGTATTGAAAATAT
AGAAATTTAAGGAGAAATAG

Downstream 100 bases:

>100_bases
AGGTCGATTCTAATCTCGCTAATCCTTTTTAATCCAGAATAAGGGAAATATGTTATACTTGTTTTTAAGAAAAAAGTCTC
ATTGAATTGGTTTTGAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLLYVIYFSQNLEIVTIFV
LFVIGAATYGSLTADKKIILKQGGSAILALISILLFKYT

Sequences:

>Translated_119_residues
MSIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLLYVIYFSQNLEIVTIFV
LFVIGAATYGSLTADKKIILKQGGSAILALISILLFKYT
>Mature_118_residues
SIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLGVFLLYVIYFSQNLEIVTIFVL
FVIGAATYGSLTADKKIILKQGGSAILALISILLFKYT

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 13266; Mature: 13135

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLG
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHH
VFLLYVIYFSQNLEIVTIFVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFKYT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIILTTIVALEHFYIFYLESIATQSDATSRVFNMEKEELAHPSVSSLFKNQGIYKALLG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHH
VFLLYVIYFSQNLEIVTIFVLFVIGAATYGSLTADKKIILKQGGSAILALISILLFKYT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]