Click here to switch to the map view.

The map label for this gene is yvfS [H]

Identifier: 221232726

GI number: 221232726

Start: 1963054

End: 1963791

Strand: Reverse

Name: yvfS [H]

Synonym: SPN23F_20230

Alternate gene names: 221232726

Gene position: 1963791-1963054 (Counterclockwise)

Preceding gene: 221232727

Following gene: 221232725

Centisome position: 88.41

GC content: 39.97

Gene sequence:

>738_bases
ATGAAACGATGGCTAGCACTTAGTAAGATAGAATTTTTATTGACCAAACGACAATTGATCTATTATCTATTGTCAGTAGG
GATGCCGACAGCCTTCTATCTATTCTTTTCTGGCATGTACCAGGACACACCAGGTGGACCCGCGAATTTTATGCGTGATT
ACCTCATCTCCATGACTGGCTTTTCCATGATGTCGACCGCTATCTTTTCATTCCCAGCTGTCTTACATACCGACAAGATG
AACAACTGGCAGAAAATATTACGTCATAGCCCAGTAAATATGGTAGAATATTATCTATCAAAGATAACAAGTATGCTGGT
TGATTATTTGGTCTCAATTCTGGTTGTTTTTACAGTTGGACATTTTGTAAGAGGTGTAGACATGCCTCTAGTAAAATGGG
TTGGAGCTGCGATTTTGCTGATTTTGGGAAGTATTGCTTTTGTAGCACTTGGCTTAACCTTGACGCTGTTACCAACTAGT
CAGCTGATGTCTGTCGTGGGCAATCTTCTTTATCTAGGATTGGCTGTTTTAGGCGGACTCTGGATGCCCGTCTCTTTATT
TCCAGACTGGATGCAAGCAATCGGGAAGCGTTTACCAAGTTATCAGTTGATGGAATTAATCAAGACCTTCTTAAATGAGG
GTGGAATCAATCTATCAGCCACAGTTTATCTACTTGTTTTTTCAGCAGTTTTATTTGGTTTGACTATTTACCTTCAAGGT
CATAAGGAGAATGCTTAA

Upstream 100 bases:

>100_bases
CTGTTAGTTCAAGCAGGATGTGGCATACAAGAAATTGAAGTTAATAATCGTAGTTTGTTGGATACAATCTTTGAAGAAAC
GCAGAAGGGAGATAACTAAG

Downstream 100 bases:

>100_bases
TGCTTGAAAGACTGAAAAGAATACATTATATGTTTTGGATCAGTTTAATTTTTATGATTTTCCCCATCCTGTCTGTAGTG
ACTGGGTGGCTTTCTGCCTG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKRWLALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGMYQDTPGGPANFMRDYLISMTGFSMMSTAIFSFPAVLHTDKM
NNWQKILRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVGHFVRGVDMPLVKWVGAAILLILGSIAFVALGLTLTLLPTS
QLMSVVGNLLYLGLAVLGGLWMPVSLFPDWMQAIGKRLPSYQLMELIKTFLNEGGINLSATVYLLVFSAVLFGLTIYLQG
HKENA

Sequences:

>Translated_245_residues
MKRWLALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGMYQDTPGGPANFMRDYLISMTGFSMMSTAIFSFPAVLHTDKM
NNWQKILRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVGHFVRGVDMPLVKWVGAAILLILGSIAFVALGLTLTLLPTS
QLMSVVGNLLYLGLAVLGGLWMPVSLFPDWMQAIGKRLPSYQLMELIKTFLNEGGINLSATVYLLVFSAVLFGLTIYLQG
HKENA
>Mature_245_residues
MKRWLALSKIEFLLTKRQLIYYLLSVGMPTAFYLFFSGMYQDTPGGPANFMRDYLISMTGFSMMSTAIFSFPAVLHTDKM
NNWQKILRHSPVNMVEYYLSKITSMLVDYLVSILVVFTVGHFVRGVDMPLVKWVGAAILLILGSIAFVALGLTLTLLPTS
QLMSVVGNLLYLGLAVLGGLWMPVSLFPDWMQAIGKRLPSYQLMELIKTFLNEGGINLSATVYLLVFSAVLFGLTIYLQG
HKENA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27448; Mature: 27448

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]