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The map label for this gene is yvfU [H]

Identifier: 221232724

GI number: 221232724

Start: 1961356

End: 1961955

Strand: Reverse

Name: yvfU [H]

Synonym: SPN23F_20210

Alternate gene names: 221232724

Gene position: 1961955-1961356 (Counterclockwise)

Preceding gene: 221232725

Following gene: 221232723

Centisome position: 88.32

GC content: 45.0

Gene sequence:

>600_bases
ATGAAAGTATTAGTCGCAGAAGATCAAAGTATGTTGCGAGATGCCATGTGTCAATTGCTCACGCTTCAACCAGATGTGGA
GTCTGTCCTTCAAGCCAAGAATGGGCAAGAAGCAATCCAACTATTAGAAAAGGAGTCTGTAGATATCGCCATCCTTGACG
TAGAAATGCCTGTTAAGACAGGTCTTGAAGTCTTGGAGTGGATACGATCAGAAAAGCTTGAAACAAAGGTGGTTGTGGTG
ACGACCTTCAAGCGTGCTGGGTATTTTGAACGTGCGGTCAAGGCTGGAGTGGATGCTTATGTATTAAAGGAACGAAGCAT
TGCAGACCTCATGCAAACCTTGCACACCGTCCTCGAAGGACGCAAGGAGTATTCGCCTGAATTGATGGAAATGGTGATGA
CCCGTCCCAATCCGTTGACAGAACAAGAGATTGCTGTCTTAAAGGGAATCGCCCGGGGCTTATCCAACCAAGAAATCGCA
GATCAGCTTTACCTCTCAAACGGAACTATTCGAAACTATGTCACCAATATTCTTTCAAAACTGGATGCTGGTAATCGAAC
AGAGGCAGCTAATATCGCAAAAGAATCTGGTTGGTTATGA

Upstream 100 bases:

>100_bases
CGAGATCGTGTTTTTCCATTTTCAGGAGAAGTAAGTGTAATCAGTCAGAAACATCCAACGGAAGTGCAAGTTCGACTACC
TTATAAGGAGAGAAACTAAG

Downstream 100 bases:

>100_bases
TGATATAATATTTTCATGAAGACTATGTGCTAAAATTGACGGTAGTGAATGGAACAATACCTATAGTAGATTGAAACTAG
AATAGTACACCTCTACTTCT

Product: response regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVV
TTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIA
DQLYLSNGTIRNYVTNILSKLDAGNRTEAANIAKESGWL

Sequences:

>Translated_199_residues
MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVV
TTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIA
DQLYLSNGTIRNYVTNILSKLDAGNRTEAANIAKESGWL
>Mature_199_residues
MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVV
TTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEGRKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIA
DQLYLSNGTIRNYVTNILSKLDAGNRTEAANIAKESGWL

Specific function: Member of the two-component regulatory system yvfT/yvfU [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=198, Percent_Identity=29.7979797979798, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1790102, Length=199, Percent_Identity=29.6482412060301, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787473, Length=199, Percent_Identity=32.6633165829146, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=26, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788712, Length=189, Percent_Identity=24.8677248677249, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1788222, Length=207, Percent_Identity=22.7053140096618, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22266; Mature: 22266

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT
CEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCHHH
GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
RKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSK
HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHH
LDAGNRTEAANIAKESGWL
CCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT
CEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCHHH
GLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLEG
HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
RKEYSPELMEMVMTRPNPLTEQEIAVLKGIARGLSNQEIADQLYLSNGTIRNYVTNILSK
HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHH
LDAGNRTEAANIAKESGWL
CCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]