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The map label for this gene is sepF

Identifier: 221232401

GI number: 221232401

Start: 1603660

End: 1604199

Strand: Reverse

Name: sepF

Synonym: SPN23F_16650

Alternate gene names: 221232401

Gene position: 1604199-1603660 (Counterclockwise)

Preceding gene: 221232402

Following gene: 221232400

Centisome position: 72.22

GC content: 37.78

Gene sequence:

>540_bases
ATGTCTTTAAAAGATAGATTCGATAGATTTATAGATTATTTTACGGAGGATGAGGATTCAAGTCTCCCTTATGAAAAAAG
AGATGAGCCTGTGTTTACTCCAGTAAATTCTTCACAGGAACCGGCTCTCCCAATGAATCAACCTTCACAGTCGGCTGGTA
CAAAAGAGAACAATATCACCAGACTTCATGCAAGACAACAGGAATTGGCAAATCAGAGTCAGCGTGCAACGGATAAGGTC
ATTATAGATGTTCGTTATCCTAGAAAATATGAGGATGCAACAGAAATTGTTGATTTATTGGCAGGAAACGAAAGTATCTT
GATTGATTTTCAGTATATGACAGAGGTGCAGGCTCGTCGTTGTTTGGACTATTTGGATGGAGCTTGTCATGTTTTAGCTG
GAAATTTGAAAAAGGTAGCTTCTACCATGTATTTGTTGACACCAGTTAATGTTATTGTAAATGTTGAAGATATCCGTTTA
CCAGATGAAGATCAACAGGGTGAGTTCGGTTTTGATATGAAGCGAAATAGAGTACGATAA

Upstream 100 bases:

>100_bases
CGAGTTAAGTATGGGAATGAGTCGTGATTATAAAGAAGCGATTCAATTCGGTTCCACTTTTGTTCGTATAGGTACATCAT
TTTTTAAGTAGGAGAGAACC

Downstream 100 bases:

>100_bases
TGATTTTTTTAATTCGTATGATTTATAATGCAGTGGATATTTACTCCCTGATTTTGGTAGCCTTCGCTGTCATGTCTTGG
TTTCCAGGTGCCTACGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTPVNSSQEPALPMNQPSQSAGTKENNITRLHARQQELANQSQRATDKV
IIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARRCLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRL
PDEDQQGEFGFDMKRNRVR

Sequences:

>Translated_179_residues
MSLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTPVNSSQEPALPMNQPSQSAGTKENNITRLHARQQELANQSQRATDKV
IIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARRCLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRL
PDEDQQGEFGFDMKRNRVR
>Mature_178_residues
SLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTPVNSSQEPALPMNQPSQSAGTKENNITRLHARQQELANQSQRATDKVI
IDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARRCLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRLP
DEDQQGEFGFDMKRNRVR

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SEPF_STRP2 (Q04JA5)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816933.1
- STRING:   Q04JA5
- EnsemblBacteria:   EBSTRT00000019372
- GeneID:   4442890
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1477
- eggNOG:   COG1799
- GeneTree:   EBGT00050000027759
- HOGENOM:   HBG700081
- OMA:   YSDAKEV
- ProtClustDB:   CLSK2752116
- GO:   GO:0005737
- HAMAP:   MF_01197
- InterPro:   IPR023052
- InterPro:   IPR007561

Pfam domain/function: PF04472 DUF552

EC number: NA

Molecular weight: Translated: 20637; Mature: 20506

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTPVNSSQEPALPMNQPSQSAGTKENNIT
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCH
RLHARQQELANQSQRATDKVIIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
CLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRLPDEDQQGEFGFDMKRNRVR
HHHHHCHHHHHHHHHHHHHHHHHHHEEHHEEEEEHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLKDRFDRFIDYFTEDEDSSLPYEKRDEPVFTPVNSSQEPALPMNQPSQSAGTKENNIT
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCH
RLHARQQELANQSQRATDKVIIDVRYPRKYEDATEIVDLLAGNESILIDFQYMTEVQARR
HHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH
CLDYLDGACHVLAGNLKKVASTMYLLTPVNVIVNVEDIRLPDEDQQGEFGFDMKRNRVR
HHHHHCHHHHHHHHHHHHHHHHHHHEEHHEEEEEHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA