Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
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Accession | NC_011900 |
Length | 2,221,315 |
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The map label for this gene is 221232393
Identifier: 221232393
GI number: 221232393
Start: 1594204
End: 1596615
Strand: Reverse
Name: 221232393
Synonym: SPN23F_16560
Alternate gene names: NA
Gene position: 1596615-1594204 (Counterclockwise)
Preceding gene: 221232394
Following gene: 221232392
Centisome position: 71.88
GC content: 43.16
Gene sequence:
>2412_bases ATGATAAGGAATAAAAAACAAGATTATGTACTGGCCTACAAGCAACCAGTTTCAACCACTTACATGGGTTGGGAAGAAGA AGCTTTACCGATAGGCAATGGTTCTTTAGGAGCAAAAGTATTTGGCCTTATAGGGGCTGAACGGATTCAATTTAATGAAA AAAGTCTCTGGTCTGGAGGTCCACTTCCTGATAGTTCAGATTATCAGGGTGGAAATCTTCAGGATCAGTATGTTTTTTTA GCTGAGATTCGGCAGGCTTTGGAGAAGAGAGATTACAATCTGGCTAAGGAACTGGCTGAGCAGCACCTAATTGGGCCAAA AACGAGTCAATATGGGACCTATCTGTCTTTTGGGGATATTCACATTGAGTTCAGCCAGCAAGGTACGACTTTGTCTCAGG TGACGGACTATCAGAGACAGCTGAATATTAGTAAGGCACTTGTGACGACTTCTTATGTCTATAAGGGAACGCGATTTGAA CGTGAAGCTTTTGCGAGTTTTCCAGATGATCTCTTGGTTCAGCGTTTTACTAAGGAAGGGGCGGAAACTCTAGATTTTAC TATAGAACTATCCTTGACCTGTGATTTGGCTTCTGATGGAAAGTATGAGCAGGAAAAATCTGATTACAAGGAGTGTAAGT TGGATATTACTGATTCTCATATCTTGATGAAGGGAAGAGTTAAGGATAATGATCTGCGGTTTGCTAGTTATCTAGCTTGG GAAACGGATGGAGATATTAGAGTTTGGTCAGATAGGGTTCAGATATCAGGAGCCAGTTATGCCAATCTCTTCTTGGCCGC TAAGACGGATTTTGCCCAAAATCCTGCTAGCAATTATCGCAAGAAACTAGATTTAGAGCAACAGGTGATAGACTTGGTGG ACACAGCTAAAGAAAAGGGCTATACCCAATTGAAATCAAGGCATATCGAGGACTACCAAGCCTTATTCCAGCGTGTTCAA TTGGATTTGGAAGCTAATGTTGACGCATTCACTACAGATGATTTGTTAAAAAATTATAAGCCACAAGAAGGGCAGGCTTT GGAGGAGCTGTTCTTCCAGTATGGACGGTATTTATTGATTAGTTCGTCCAGAGACTGCCCAGATGCTCTACCAGCTAACC TACAGGGAGTCTGGAATGCGGTCGACAATCCTCCTTGGAATTCGGACTATCACTTAAATGTCAATCTGCAGATGAATTAT TGGCCAGCCTATGTTACCAATCTCCTAGAGGCGGTCTTTCCGGTCATCAACTATGTAGATGATTTGCGTGTCTATGGTCG TCTAGCGGCTGTAAAGTATGCAGGAATCGTCTCTCAAAAAGGTGAGGAAAATGGTTGGTTGGTTCATACTCAAGCGACTC CCTTTGGTTGGACGGCACCTGGTTGGGATTACTATTGGGGTTGGTCACCAGCTGCCAATGCGTGGATGATGCAAACTGTT TATGAAGCCTATTCATTTTATAGGGACCAAGACTATCTCAGGGAGAAAATTTATCCCATGTTGAGGGAAACGGTTCGTTT TTGGAATGCCTTTTTACATAAGGATCAGCAGGCGCAGCGTTGGGTGTCTTCTCCGTCTTATTCCCCAGAACATGGGCCGA TTTCGATTGGCAATACTTATGACCAATCTCTGATTTGGCAGTTATTTCATGATTTTATTCAGGCTGCTCAGGAATTGGGA CTGGATGAGGACTTGTTGACTGAGGTTAAGGAGAAGTCTGATTTACTAAATCCTTTGCAAATCACTCAATCTGGTCGAAT CAGGGAGTGGTATGAGGAGGAAGAGCAGTATTTTCAAAATGAGAAAGTGGAGGCCCAGCATCGGCACGCTTCCCATCTAG TGGGACTCTATCCTGGCAATCTCTTTAGCTACAAGGGACAAGAGTATATTGAAGCGGCACGTGCTAGCCTCAATGATCGT GGAGATGGCGGCACAGGCTGGTCCAAGGCTAATAAGATCAATCTCTGGGCGCGTTTGGGAGATGGCAATCGAGCCCATAA ATTATTGGCAGAGCAGTTAAAAACATCCACCTTGCCAAATCTTTGGTGTAGCCATCCTCCTTTTCAGATAGATGGTAATT TTGGTGCTACTAGTGGCATGGCAGAAATGTTACTCCAGTCTCATGCAGCTTATCTGGTACCTCTAGCTGCCCTACCTGAT GCTTGGTCAACAGGTTCTGTTTCAGGCTTAATGGCACGTGGACATTTTGAAGTGAGCATGAGCTGGGAAGATAAAAAACT CTTACAGTTGACCATTTTATCAAGGAGTGGAGGAGATTTGCGAGTTTCTTATCCAGATATTGAGAAGAGTGTGATTAAAA TGAATCAAGAAAAAATAAAAGCGAAATGCATGGGGAAAGATTGTATTTCGGTGGCAACAGCAGAAGGTGATCTTGTTCAA TTTTATTTTTAA
Upstream 100 bases:
>100_bases TTCGACGAAAAATTGAACGTCGTTTCTGAATACTACCTTGGAAAATAAAAAATTGTAAGTCTAGAATTGATTTCTAGGCT TTTTATGTTAGTATGGAAGT
Downstream 100 bases:
>100_bases GAAGATGTTATAAGGCAGTAATTTGAAACTTCCTTTTAATAAGGATTTAAGAATATAGGCAGTTTCCAACTAGTTGAAAA AGCGTTATAATGATAATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Trehalose And Maltose Hydrolase-Like Protein; Fibronectin Type III Domain-Containing Protein; 1 2-A-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MIRNKKQDYVLAYKQPVSTTYMGWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGGPLPDSSDYQGGNLQDQYVFL AEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDIHIEFSQQGTTLSQVTDYQRQLNISKALVTTSYVYKGTRFE REAFASFPDDLLVQRFTKEGAETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKGYTQLKSRHIEDYQALFQRVQ LDLEANVDAFTTDDLLKNYKPQEGQALEELFFQYGRYLLISSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNY WPAYVTNLLEAVFPVINYVDDLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV YEAYSFYRDQDYLREKIYPMLRETVRFWNAFLHKDQQAQRWVSSPSYSPEHGPISIGNTYDQSLIWQLFHDFIQAAQELG LDEDLLTEVKEKSDLLNPLQITQSGRIREWYEEEEQYFQNEKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDR GDGGTGWSKANKINLWARLGDGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIKAKCMGKDCISVATAEGDLVQ FYF
Sequences:
>Translated_803_residues MIRNKKQDYVLAYKQPVSTTYMGWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGGPLPDSSDYQGGNLQDQYVFL AEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDIHIEFSQQGTTLSQVTDYQRQLNISKALVTTSYVYKGTRFE REAFASFPDDLLVQRFTKEGAETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKGYTQLKSRHIEDYQALFQRVQ LDLEANVDAFTTDDLLKNYKPQEGQALEELFFQYGRYLLISSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNY WPAYVTNLLEAVFPVINYVDDLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV YEAYSFYRDQDYLREKIYPMLRETVRFWNAFLHKDQQAQRWVSSPSYSPEHGPISIGNTYDQSLIWQLFHDFIQAAQELG LDEDLLTEVKEKSDLLNPLQITQSGRIREWYEEEEQYFQNEKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDR GDGGTGWSKANKINLWARLGDGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIKAKCMGKDCISVATAEGDLVQ FYF >Mature_803_residues MIRNKKQDYVLAYKQPVSTTYMGWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGGPLPDSSDYQGGNLQDQYVFL AEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDIHIEFSQQGTTLSQVTDYQRQLNISKALVTTSYVYKGTRFE REAFASFPDDLLVQRFTKEGAETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKGYTQLKSRHIEDYQALFQRVQ LDLEANVDAFTTDDLLKNYKPQEGQALEELFFQYGRYLLISSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNY WPAYVTNLLEAVFPVINYVDDLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV YEAYSFYRDQDYLREKIYPMLRETVRFWNAFLHKDQQAQRWVSSPSYSPEHGPISIGNTYDQSLIWQLFHDFIQAAQELG LDEDLLTEVKEKSDLLNPLQITQSGRIREWYEEEEQYFQNEKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDR GDGGTGWSKANKINLWARLGDGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIKAKCMGKDCISVATAEGDLVQ FYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91564; Mature: 91564
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRNKKQDYVLAYKQPVSTTYMGWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGG CCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCC PLPDSSDYQGGNLQDQYVFLAEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECEE HIEFSQQGTTLSQVTDYQRQLNISKALVTTSYVYKGTRFEREAFASFPDDLLVQRFTKEG EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCC AETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW CCEEEEEEEEEEEEEECCCCCCCHHHHHHHHEEEEECCCEEEEECCCCCCCCEEEEEEEE ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKG CCCCCEEEEECEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCC YTQLKSRHIEDYQALFQRVQLDLEANVDAFTTDDLLKNYKPQEGQALEELFFQYGRYLLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHCCCEEEE SSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNYWPAYVTNLLEAVFPVINYVD ECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH DLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH YEAYSFYRDQDYLREKIYPMLRETVRFWNAFLHKDQQAQRWVSSPSYSPEHGPISIGNTY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEECCCCH DQSLIWQLFHDFIQAAQELGLDEDLLTEVKEKSDLLNPLQITQSGRIREWYEEEEQYFQN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHC EKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDRGDGGTGWSKANKINLWARLG CCHHHHHHHHHHEEEECCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEC DGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD CCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHEEEHHHCCC AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIK CCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHH AKCMGKDCISVATAEGDLVQFYF HHHCCCHHHEEEECCCCEEEEEC >Mature Secondary Structure MIRNKKQDYVLAYKQPVSTTYMGWEEEALPIGNGSLGAKVFGLIGAERIQFNEKSLWSGG CCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCC PLPDSSDYQGGNLQDQYVFLAEIRQALEKRDYNLAKELAEQHLIGPKTSQYGTYLSFGDI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECEE HIEFSQQGTTLSQVTDYQRQLNISKALVTTSYVYKGTRFEREAFASFPDDLLVQRFTKEG EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCC AETLDFTIELSLTCDLASDGKYEQEKSDYKECKLDITDSHILMKGRVKDNDLRFASYLAW CCEEEEEEEEEEEEEECCCCCCCHHHHHHHHEEEEECCCEEEEECCCCCCCCEEEEEEEE ETDGDIRVWSDRVQISGASYANLFLAAKTDFAQNPASNYRKKLDLEQQVIDLVDTAKEKG CCCCCEEEEECEEEECCCCEEEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCC YTQLKSRHIEDYQALFQRVQLDLEANVDAFTTDDLLKNYKPQEGQALEELFFQYGRYLLI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCHHHHHHHHHCCCEEEE SSSRDCPDALPANLQGVWNAVDNPPWNSDYHLNVNLQMNYWPAYVTNLLEAVFPVINYVD ECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH DLRVYGRLAAVKYAGIVSQKGEENGWLVHTQATPFGWTAPGWDYYWGWSPAANAWMMQTV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHH YEAYSFYRDQDYLREKIYPMLRETVRFWNAFLHKDQQAQRWVSSPSYSPEHGPISIGNTY HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEECCCCH DQSLIWQLFHDFIQAAQELGLDEDLLTEVKEKSDLLNPLQITQSGRIREWYEEEEQYFQN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHC EKVEAQHRHASHLVGLYPGNLFSYKGQEYIEAARASLNDRGDGGTGWSKANKINLWARLG CCHHHHHHHHHHEEEECCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEC DGNRAHKLLAEQLKTSTLPNLWCSHPPFQIDGNFGATSGMAEMLLQSHAAYLVPLAALPD CCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCHHEEEHHHCCC AWSTGSVSGLMARGHFEVSMSWEDKKLLQLTILSRSGGDLRVSYPDIEKSVIKMNQEKIK CCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHH AKCMGKDCISVATAEGDLVQFYF HHHCCCHHHEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA