| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is ssb1
Identifier: 221232315
GI number: 221232315
Start: 1521241
End: 1521948
Strand: Reverse
Name: ssb1
Synonym: SPN23F_15710
Alternate gene names: NA
Gene position: 1521948-1521241 (Counterclockwise)
Preceding gene: 221232316
Following gene: 221232314
Centisome position: 68.52
GC content: 36.02
Gene sequence:
>708_bases ATGGCTGATTTAACATTTGCAGAATTACAGCGAAAAATGCAAATCGAAAAACAAACGAAACAGGGAGTGAAATATCCGTT TAGAACCGCAGAGGACATAAATAATAAATTTAAGTCTTTGGATAGCGGTTGGAGTGTATCATTTCCAGAAGATGACATCA TTCAAAAAGGTGACAAACTGTATTATAAAGCGGTAGCTGTTGTTAAAAGAGAAAGTGATGGCACGATTGAAAAAGCTATT GGATGGGCTAGAGAAGAAGATGTACCAATTTTTCACACACAAAAAGGGGATGTGAAACAGATGCAAGATCCACAATGGAC AGGTGCGGTTGGTTCTTATGCTAGAAAATATGCTTTACAAGGTTTATTTGCCATTGGAGGTGAGGATGTTGATGAGTATC CAGTAGAAGAAAGCCAAGAGCAAGGACAGAATAATCAGCAACAGAAACCAAACAATCAGCAAGCCCAAGGACAAAATCAA GTAAGGTATATTGACAACACTCAATATCAAGAAATTAACGACCTTATAAATGATATTGCAAAAATTAAAGGGATGCCGTT CGATACGCTTGCTAACTATGTACTATCTGAAAAATTAAAAGGTTTACAAGATTTTCATAGAGTACAAGTTGGTGACTACG AGGTATTGAAAAACTATTTAACTGAACAACTAGCAAAGGCAAAAGCAAAAGCAAAGAGAGGTAATTAA
Upstream 100 bases:
>100_bases TTGAAATTTCAAAAGGTGAAATCATCAAGAATATTGTAAACGAAAACTTTACTAACTATTCATGGGATGTGCCTTTTAGT AGACTTGGAGGATAGATAAT
Downstream 100 bases:
>100_bases ACATGGTAAAAGATGTAACTAATAGCTTGACAGAAATCAAGGTGGATTTTCAACCTGCAGTAATTAATGTTGACCGTGAG GCGATCGAGGCACAAGTAGC
Product: phage single-strand DNA binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MADLTFAELQRKMQIEKQTKQGVKYPFRTAEDINNKFKSLDSGWSVSFPEDDIIQKGDKLYYKAVAVVKRESDGTIEKAI GWAREEDVPIFHTQKGDVKQMQDPQWTGAVGSYARKYALQGLFAIGGEDVDEYPVEESQEQGQNNQQQKPNNQQAQGQNQ VRYIDNTQYQEINDLINDIAKIKGMPFDTLANYVLSEKLKGLQDFHRVQVGDYEVLKNYLTEQLAKAKAKAKRGN
Sequences:
>Translated_235_residues MADLTFAELQRKMQIEKQTKQGVKYPFRTAEDINNKFKSLDSGWSVSFPEDDIIQKGDKLYYKAVAVVKRESDGTIEKAI GWAREEDVPIFHTQKGDVKQMQDPQWTGAVGSYARKYALQGLFAIGGEDVDEYPVEESQEQGQNNQQQKPNNQQAQGQNQ VRYIDNTQYQEINDLINDIAKIKGMPFDTLANYVLSEKLKGLQDFHRVQVGDYEVLKNYLTEQLAKAKAKAKRGN >Mature_234_residues ADLTFAELQRKMQIEKQTKQGVKYPFRTAEDINNKFKSLDSGWSVSFPEDDIIQKGDKLYYKAVAVVKRESDGTIEKAIG WAREEDVPIFHTQKGDVKQMQDPQWTGAVGSYARKYALQGLFAIGGEDVDEYPVEESQEQGQNNQQQKPNNQQAQGQNQV RYIDNTQYQEINDLINDIAKIKGMPFDTLANYVLSEKLKGLQDFHRVQVGDYEVLKNYLTEQLAKAKAKAKRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26833; Mature: 26702
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00205 TRANSFERRIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLTFAELQRKMQIEKQTKQGVKYPFRTAEDINNKFKSLDSGWSVSFPEDDIIQKGDKL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHH YYKAVAVVKRESDGTIEKAIGWAREEDVPIFHTQKGDVKQMQDPQWTGAVGSYARKYALQ HHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHHHHHH GLFAIGGEDVDEYPVEESQEQGQNNQQQKPNNQQAQGQNQVRYIDNTQYQEINDLINDIA HHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHH KIKGMPFDTLANYVLSEKLKGLQDFHRVQVGDYEVLKNYLTEQLAKAKAKAKRGN HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADLTFAELQRKMQIEKQTKQGVKYPFRTAEDINNKFKSLDSGWSVSFPEDDIIQKGDKL CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHH YYKAVAVVKRESDGTIEKAIGWAREEDVPIFHTQKGDVKQMQDPQWTGAVGSYARKYALQ HHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHHHHHH GLFAIGGEDVDEYPVEESQEQGQNNQQQKPNNQQAQGQNQVRYIDNTQYQEINDLINDIA HHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHH KIKGMPFDTLANYVLSEKLKGLQDFHRVQVGDYEVLKNYLTEQLAKAKAKAKRGN HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA