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The map label for this gene is ssb

Identifier: 221230926

GI number: 221230926

Start: 3233333

End: 3233839

Strand: Reverse

Name: ssb

Synonym: MLBr_02684

Alternate gene names: 221230926

Gene position: 3233839-3233333 (Counterclockwise)

Preceding gene: 221230927

Following gene: 221230925

Centisome position: 98.95

GC content: 62.92

Gene sequence:

>507_bases
GTGGCTGGCGACACCACCATTACCATTGTCGGAAATTTGACCGCTGACCCTGAGTTGCGGTTCACTTCGTCCGGTGCTGC
CGTGGTGAACTTCACTGTTGCATCGACACCGCGGATCTATGATCGTCAAAGCGGTGAGTGGAAAGACGGCGAGGCGCTGT
TCCTTCGGTGCAATATTTGGCGGGAGGCTGCGGAGAACGTGGCCGAAAGCCTCACCCGGGGGGCGCGGGTGATCGTCACC
GGTCGGCTCAAGCAGCGTTCCTTCGAGACCCGCGAGGGCGAGAAACGGACAGTTGTCGAGGTCGAGGTCGATGAGATCGG
CCCGTCGCTTCGGTATGCCACCGCCAAAGTCAACAAGGCTAGCCGCAGTGGTGGCGGGGGCGGCGGCTTCGGCAGCGGAT
CCCGTCAGGCGCCTGCTCAAATGAGTGGCGGAGTAGGTGACGATCCGTGGGGCAGTGCCCCAACCTCGGGGTCCTTCGGC
GTCGGTGACGAAGAACCCCCCTTCTAG

Upstream 100 bases:

>100_bases
ATCGTCCGCGGTTTGCGCCCTTGCATAGGTTCTCCGAAAACACGCTCATGACCAACGCCTGCACCAAGGCGAGGAACAGG
GCCAAATTAGGGAGGAAATT

Downstream 100 bases:

>100_bases
TAACGAAACGGAAAGAATTACACACATGGCCAAGTCCACCAAGCGGCGTCCAGCACCGGAGAAGCCGGCCAAAGCGCGTA
AATGCGTTTTCTGCGCCAAG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVT
GRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKASRSGGGGGGFGSGSRQAPAQMSGGVGDDPWGSAPTSGSFG
VGDEEPPF

Sequences:

>Translated_168_residues
MAGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVT
GRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKASRSGGGGGGFGSGSRQAPAQMSGGVGDDPWGSAPTSGSFG
VGDEEPPF
>Mature_167_residues
AGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVTG
RLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKASRSGGGGGGFGSGSRQAPAQMSGGVGDDPWGSAPTSGSFGV
GDEEPPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=102, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_MYCLE (P46390)

Other databases:

- EMBL:   L39923
- EMBL:   AL022118
- EMBL:   AL583926
- PIR:   B87245
- RefSeq:   NP_302712.1
- PDB:   3AFP
- PDB:   3AFQ
- PDBsum:   3AFP
- PDBsum:   3AFQ
- ProteinModelPortal:   P46390
- SMR:   P46390
- EnsemblBacteria:   EBMYCT00000028005
- GeneID:   908269
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML2684
- NMPDR:   fig|272631.1.peg.1584
- Leproma:   ML2684
- GeneTree:   EBGT00050000016944
- HOGENOM:   HBG755544
- OMA:   PAGGYSD
- ProtClustDB:   PRK07772
- BioCyc:   MLEP272631:ML2684-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 17701; Mature: 17569

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIW
CCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCEECCCCCCCCCCCEEEEEEHHH
REAAENVAESLTRGARVIVTGRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKA
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEEECCCC
SRSGGGGGGFGSGSRQAPAQMSGGVGDDPWGSAPTSGSFGVGDEEPPF
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIW
CCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCEECCCCCCCCCCCEEEEEEHHH
REAAENVAESLTRGARVIVTGRLKQRSFETREGEKRTVVEVEVDEIGPSLRYATAKVNKA
HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEEEEECCCC
SRSGGGGGGFGSGSRQAPAQMSGGVGDDPWGSAPTSGSFGVGDEEPPF
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969512; 11234002