Click here to switch to the map view.

The map label for this gene is sopA [C]

Identifier: 221230189

GI number: 221230189

Start: 1627962

End: 1628825

Strand: Direct

Name: sopA [C]

Synonym: MLBr_01367

Alternate gene names: 221230189

Gene position: 1627962-1628825 (Clockwise)

Preceding gene: 221230188

Following gene: 221230190

Centisome position: 49.81

GC content: 60.19

Gene sequence:

>864_bases
ATGATCGACCACCTCGATAGCGTTGTAGAGATCGGGCTGACCGGACGGCCGCCACGGGCCATCCCAGAACCCAGGCCGCG
TAGCTCGCACGGTCCGGCCAAGGTCGTCGCGATGTGCAACCAGAAGGGTGGCGTCGGGAAAACCACGTCGACGATCAACC
TGGGTGCCGCCCTCACCGAATTCGGCCGGAGGGTGCTGCTGGTGGATATAGACCCGCAGGGCGCACTGTCGGCAGGCCTT
GGCGTACCGCATTACGAGCTAGACCGGACAATCCACAACCTAATGGTGGAACCACTGGTATCGATCGACGACGTGCTGAT
CCACACACGGGTCAGATACTTAGATTTGGTACCCAGCAATATCGACCTGTCGGCTGCCGAGATCCAGTTGGTTAACGAGG
TGGGGCGAGAGCAGACCTTGGCGCGGGCGTTGCACCCGGTACTGGACCGCTACGATTATGTGCTGATTGACTGCCAGCCT
TCGCTGGGCCTACTCACCGTTAACGGACTGGCTTGTGCAGAGGGCGTAGTTATCCCGACGGAATGCGAATTCTTCTCGCT
GCGTGGGCTGGCGTTGCTTACCGACACCGTAGACAAGGTGCGTGATCGGCTCAACCCGAAGTTGGAAATCAGCGGCATCC
TGATTACTCGATATGACCCGCGCACTGTCAACGCACGCGAGGTTATGGCACGTGTCGTAGAACGGTTCGGCGACCTGGTC
TTTGACACTGTGATCACCCGTACGGTCCGGTTTCCTGAGACCAGTGTCGCGGGTGAACCCATCACCACGTGGGCACCGAA
ATCGGGCGGCGCCAGGGCCTATCGCGCATTGGCCTGTGAATTCATCGACCGCTTCGGCGCGTGA

Upstream 100 bases:

>100_bases
CCCCACTACCACTGTGGGTCTCCAAACTCGGGCGCGTACAGACGTTAGACTTTCCTGCGATGCTCACCGTGATGCCTGTC
CCTATGAGTCGTTACCGGCA

Downstream 100 bases:

>100_bases
ACAGTGAGGCTCCACACCAGAACGGCTTCCAGGTTCGGCTCACCAACTTTGAGGGGCCGTTCGATCTGTTGCTACACTTG
ATCTGCGCCCACCGCCTAGA

Product: putative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIDHLDSVVEIGLTGRPPRAIPEPRPRSSHGPAKVVAMCNQKGGVGKTTSTINLGAALTEFGRRVLLVDIDPQGALSAGL
GVPHYELDRTIHNLMVEPLVSIDDVLIHTRVRYLDLVPSNIDLSAAEIQLVNEVGREQTLARALHPVLDRYDYVLIDCQP
SLGLLTVNGLACAEGVVIPTECEFFSLRGLALLTDTVDKVRDRLNPKLEISGILITRYDPRTVNAREVMARVVERFGDLV
FDTVITRTVRFPETSVAGEPITTWAPKSGGARAYRALACEFIDRFGA

Sequences:

>Translated_287_residues
MIDHLDSVVEIGLTGRPPRAIPEPRPRSSHGPAKVVAMCNQKGGVGKTTSTINLGAALTEFGRRVLLVDIDPQGALSAGL
GVPHYELDRTIHNLMVEPLVSIDDVLIHTRVRYLDLVPSNIDLSAAEIQLVNEVGREQTLARALHPVLDRYDYVLIDCQP
SLGLLTVNGLACAEGVVIPTECEFFSLRGLALLTDTVDKVRDRLNPKLEISGILITRYDPRTVNAREVMARVVERFGDLV
FDTVITRTVRFPETSVAGEPITTWAPKSGGARAYRALACEFIDRFGA
>Mature_287_residues
MIDHLDSVVEIGLTGRPPRAIPEPRPRSSHGPAKVVAMCNQKGGVGKTTSTINLGAALTEFGRRVLLVDIDPQGALSAGL
GVPHYELDRTIHNLMVEPLVSIDDVLIHTRVRYLDLVPSNIDLSAAEIQLVNEVGREQTLARALHPVLDRYDYVLIDCQP
SLGLLTVNGLACAEGVVIPTECEFFSLRGLALLTDTVDKVRDRLNPKLEISGILITRYDPRTVNAREVMARVVERFGDLV
FDTVITRTVRFPETSVAGEPITTWAPKSGGARAYRALACEFIDRFGA

Specific function: May play a role in septum formation [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 31371; Mature: 31371

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDHLDSVVEIGLTGRPPRAIPEPRPRSSHGPAKVVAMCNQKGGVGKTTSTINLGAALTE
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHH
FGRRVLLVDIDPQGALSAGLGVPHYELDRTIHNLMVEPLVSIDDVLIHTRVRYLDLVPSN
HCCEEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
IDLSAAEIQLVNEVGREQTLARALHPVLDRYDYVLIDCQPSLGLLTVNGLACAEGVVIPT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCHHHHCCEEECC
ECEFFSLRGLALLTDTVDKVRDRLNPKLEISGILITRYDPRTVNAREVMARVVERFGDLV
CCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
FDTVITRTVRFPETSVAGEPITTWAPKSGGARAYRALACEFIDRFGA
HHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDHLDSVVEIGLTGRPPRAIPEPRPRSSHGPAKVVAMCNQKGGVGKTTSTINLGAALTE
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHH
FGRRVLLVDIDPQGALSAGLGVPHYELDRTIHNLMVEPLVSIDDVLIHTRVRYLDLVPSN
HCCEEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC
IDLSAAEIQLVNEVGREQTLARALHPVLDRYDYVLIDCQPSLGLLTVNGLACAEGVVIPT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCHHHHCCEEECC
ECEFFSLRGLALLTDTVDKVRDRLNPKLEISGILITRYDPRTVNAREVMARVVERFGDLV
CCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
FDTVITRTVRFPETSVAGEPITTWAPKSGGARAYRALACEFIDRFGA
HHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]