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The map label for this gene is ybcL [C]

Identifier: 221230140

GI number: 221230140

Start: 1537607

End: 1538137

Strand: Direct

Name: ybcL [C]

Synonym: MLBr_01289

Alternate gene names: 221230140

Gene position: 1537607-1538137 (Clockwise)

Preceding gene: 221230139

Following gene: 221230144

Centisome position: 47.05

GC content: 59.51

Gene sequence:

>531_bases
ATGAGTTTGCCGCCTGACCCGTATGCTGCATTGCCCAAGCTGCCGTCGTTTCACCTGACGTCGGATTCGATTACCGACGG
CCAACCGTTGGCTACACCGCAGATCAGCGGTATCATGGGTGCGGGGGGAGCAGATGTCAGCCCTCAACTGAGCTGGTCGG
GATTTCCGACCGAGACCTGTAGCTTTGCGGTCACCGTCTACGATCCCGACGCACCGACCCTATCTGGATTTTGGCACTGG
GCAGTGGCCAATTTGCCTGCAGACGTCACCGAGTTGCCAGCAGGTGTGGGCAATGACGGTGAACTTCCGGCCGGAGCGTT
GACGTTGATCAATGATGCGGGCATGCGCCGTTACATCGGCGCCGCTCCGCCGCCTGGCCACGGTGTGCACCGATATTACG
TGGCGGTGCATGCCGTGCGGGTCCAAAAGCTCAATCTCAGCGAGGACGCAAGTCCGGCTTTTCTGGGATTCAATCTTTTC
CAGCATGCAATAGCTCGCGCCGTCATCCACGGCACCTACGAACAGCACTAG

Upstream 100 bases:

>100_bases
GAGCGGGTCTCCATCGATGCGCTCAAGTTTGGCATCGATGTGCTGGCGCACTTCCTGACACATTGCTAATCGCAAAGTAT
CAATCACGAGAGGATCGCCC

Downstream 100 bases:

>100_bases
CCGGGTCACAGCTGCGGCCGGTCGCGTTTTAAGGATAAATGTTGGACGGTTGTGACATAATCGTATATACGTTCGAACAA
TCCTAAGTGTGGCTTTAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSLPPDPYAALPKLPSFHLTSDSITDGQPLATPQISGIMGAGGADVSPQLSWSGFPTETCSFAVTVYDPDAPTLSGFWHW
AVANLPADVTELPAGVGNDGELPAGALTLINDAGMRRYIGAAPPPGHGVHRYYVAVHAVRVQKLNLSEDASPAFLGFNLF
QHAIARAVIHGTYEQH

Sequences:

>Translated_176_residues
MSLPPDPYAALPKLPSFHLTSDSITDGQPLATPQISGIMGAGGADVSPQLSWSGFPTETCSFAVTVYDPDAPTLSGFWHW
AVANLPADVTELPAGVGNDGELPAGALTLINDAGMRRYIGAAPPPGHGVHRYYVAVHAVRVQKLNLSEDASPAFLGFNLF
QHAIARAVIHGTYEQH
>Mature_175_residues
SLPPDPYAALPKLPSFHLTSDSITDGQPLATPQISGIMGAGGADVSPQLSWSGFPTETCSFAVTVYDPDAPTLSGFWHWA
VANLPADVTELPAGVGNDGELPAGALTLINDAGMRRYIGAAPPPGHGVHRYYVAVHAVRVQKLNLSEDASPAFLGFNLFQ
HAIARAVIHGTYEQH

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=161, Percent_Identity=45.3416149068323, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI1786990, Length=152, Percent_Identity=45.3947368421053, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18554; Mature: 18423

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPDPYAALPKLPSFHLTSDSITDGQPLATPQISGIMGAGGADVSPQLSWSGFPTETC
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCE
SFAVTVYDPDAPTLSGFWHWAVANLPADVTELPAGVGNDGELPAGALTLINDAGMRRYIG
EEEEEEECCCCCCCCCCCEEHHHCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHCC
AAPPPGHGVHRYYVAVHAVRVQKLNLSEDASPAFLGFNLFQHAIARAVIHGTYEQH
CCCCCCCCCCEEHEEHEEHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLPPDPYAALPKLPSFHLTSDSITDGQPLATPQISGIMGAGGADVSPQLSWSGFPTETC
CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCE
SFAVTVYDPDAPTLSGFWHWAVANLPADVTELPAGVGNDGELPAGALTLINDAGMRRYIG
EEEEEEECCCCCCCCCCCEEHHHCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCHHHHCC
AAPPPGHGVHRYYVAVHAVRVQKLNLSEDASPAFLGFNLFQHAIARAVIHGTYEQH
CCCCCCCCCCEEHEEHEEHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]