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The map label for this gene is rnz [C]

Identifier: 221230069

GI number: 221230069

Start: 1370136

End: 1370918

Strand: Direct

Name: rnz [C]

Synonym: MLBr_01173

Alternate gene names: 221230069

Gene position: 1370136-1370918 (Clockwise)

Preceding gene: 221230068

Following gene: 221230070

Centisome position: 41.92

GC content: 62.45

Gene sequence:

>783_bases
GTGACCGTGCGCATAACCGTGCTCGGCTGCTCCGGCAGTGTCGTGGGGCCGGATTCGCCTGCGTCGGGTTATCTGCTACG
AGCCCCGGACACCCCGCCGCTGGTTCTTGACTTCGGTGGGGGAGTGCTCGGTGCGCTGCAGCGACACGCGGATCCTGGCT
CGGTGCATGTGCTGTTGTCACATCTGCACGCTGACCACTGCTTGGACATGCCCGGACTGTTCGTGTGGCGTCGCTATCAT
CCGACACGCCCGGTGGGCAAGGCGCTGCTATATGGCCCGGACGATACCTGGTTGCGGTTGGGGGCGGCGTCGTCACCGTA
CGGCGGCGAGATCGACGATTGCTCTGATATCTTCGATGTTCGCCATTGGGTCGACGGTGAACCGGTGCCCCTGGGAGCGC
TGATGATAATGCCGCGGCTGGTGGCTCATCCAACGGAATCCTACGGCTTGCGTATCACCGATCCCAGCGGTGCGTCGTTG
GTCTACAGCGGTGACACTGGTAGCTGCGACCAACTTGTCGAACTGGCTCGGGGTGCGGATGTCTTCCTCTGCGAAGCATC
CTGGACACACTCGCCGGACAGACCGCCGAATCTGCATCTGTCGGGCACCGAGGCTGGCAGGGCGGCGGCACAAGCAAGTG
TCCGTGAGCTGTTGCTAACGCATATCCCGCCTTGGACGTCACGTGAGGACGTTATTAGTGAGGCCAAAGCGGAATTCGAT
GGTCCGGTGCACGCGGTGGTGTCCGGTGAGACCTTCGATATCCAAGCTCCCGAACGAGTCTGA

Upstream 100 bases:

>100_bases
TGCGCGACTTCATTCTCGTGTCCGTTAGATGAGTGCAAGAGATTCTGATCACCTTAATGGGCAATGTTTTCCTCATCCTG
GTATCGGGCATGGCACAGTA

Downstream 100 bases:

>100_bases
GCTGGCTTACGGCTTGTCGCAGGTTGCTTGCCTGCTTCTTGCGCGGACGCCGTGAAGGCGCGCCACCCTCGGCGGGCTAG
GGTTGCTGCGTGTCCACACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTVRITVLGCSGSVVGPDSPASGYLLRAPDTPPLVLDFGGGVLGALQRHADPGSVHVLLSHLHADHCLDMPGLFVWRRYH
PTRPVGKALLYGPDDTWLRLGAASSPYGGEIDDCSDIFDVRHWVDGEPVPLGALMIMPRLVAHPTESYGLRITDPSGASL
VYSGDTGSCDQLVELARGADVFLCEASWTHSPDRPPNLHLSGTEAGRAAAQASVRELLLTHIPPWTSREDVISEAKAEFD
GPVHAVVSGETFDIQAPERV

Sequences:

>Translated_260_residues
MTVRITVLGCSGSVVGPDSPASGYLLRAPDTPPLVLDFGGGVLGALQRHADPGSVHVLLSHLHADHCLDMPGLFVWRRYH
PTRPVGKALLYGPDDTWLRLGAASSPYGGEIDDCSDIFDVRHWVDGEPVPLGALMIMPRLVAHPTESYGLRITDPSGASL
VYSGDTGSCDQLVELARGADVFLCEASWTHSPDRPPNLHLSGTEAGRAAAQASVRELLLTHIPPWTSREDVISEAKAEFD
GPVHAVVSGETFDIQAPERV
>Mature_259_residues
TVRITVLGCSGSVVGPDSPASGYLLRAPDTPPLVLDFGGGVLGALQRHADPGSVHVLLSHLHADHCLDMPGLFVWRRYHP
TRPVGKALLYGPDDTWLRLGAASSPYGGEIDDCSDIFDVRHWVDGEPVPLGALMIMPRLVAHPTESYGLRITDPSGASLV
YSGDTGSCDQLVELARGADVFLCEASWTHSPDRPPNLHLSGTEAGRAAAQASVRELLLTHIPPWTSREDVISEAKAEFDG
PVHAVVSGETFDIQAPERV

Specific function: Zinc Phosphodiesterase, Which Displays Some Trna 3'- Processing Endonuclease Activity. Probably Involved In Trna Maturation, By Removing A 3'Trailer From Precursor Trna. [C]

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the atsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: NA

EC number: 3.1.26.11 [C]

Molecular weight: Translated: 27808; Mature: 27676

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRITVLGCSGSVVGPDSPASGYLLRAPDTPPLVLDFGGGVLGALQRHADPGSVHVLLS
CEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHH
HLHADHCLDMPGLFVWRRYHPTRPVGKALLYGPDDTWLRLGAASSPYGGEIDDCSDIFDV
HHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHH
RHWVDGEPVPLGALMIMPRLVAHPTESYGLRITDPSGASLVYSGDTGSCDQLVELARGAD
HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCC
VFLCEASWTHSPDRPPNLHLSGTEAGRAAAQASVRELLLTHIPPWTSREDVISEAKAEFD
EEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
GPVHAVVSGETFDIQAPERV
CCEEEEECCCEEECCCCCCC
>Mature Secondary Structure 
TVRITVLGCSGSVVGPDSPASGYLLRAPDTPPLVLDFGGGVLGALQRHADPGSVHVLLS
EEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHH
HLHADHCLDMPGLFVWRRYHPTRPVGKALLYGPDDTWLRLGAASSPYGGEIDDCSDIFDV
HHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHH
RHWVDGEPVPLGALMIMPRLVAHPTESYGLRITDPSGASLVYSGDTGSCDQLVELARGAD
HHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHCCCC
VFLCEASWTHSPDRPPNLHLSGTEAGRAAAQASVRELLLTHIPPWTSREDVISEAKAEFD
EEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
GPVHAVVSGETFDIQAPERV
CCEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]