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The map label for this gene is atpD [H]

Identifier: 221230053

GI number: 221230053

Start: 1336115

End: 1337572

Strand: Direct

Name: atpD [H]

Synonym: MLBr_01145

Alternate gene names: 221230053

Gene position: 1336115-1337572 (Clockwise)

Preceding gene: 221230052

Following gene: 221230054

Centisome position: 40.88

GC content: 58.98

Gene sequence:

>1458_bases
ATGTCTACTACTAAGACGACGAAAATGACTGTAAAGACTGGAAGCAAGGGGACCAGCGGTCGCGTGGTACGGGTTACTGG
TCCTGTCGTCGACGTCGAATTCCCGCACGGTTTTGTCCCGGAGTTGTTCAACGCGCTAAATGCGAAGACCACCTTCTCCT
CGCTTGCCAAGACCCTCACGCTTGAGGTTGCGCAGCATCTCGGCGACAATTTAGTGCGCACCATCTCGTTGCAGCCTACC
GACGGGCTGGTGCGCGGAGTTGAGGTAACCGACACTGGTAACTCGATCTCGGTGCCGGTTGGCGAGGGCGTCAAGGGTCA
TGTCTTCAACGCGCTGGGGTACTGCCTGGATGAGCCCGGGTACGGAGACGAGTTCGAGCACTGGTCGATTCACCGCAAGC
CGCCTTCCTTCGAGGAGCTTGAGCCTCGTACTGAGATGCTCGAGACCGGCCTGAAGGTCGTGGATTTGCTGACTCCGTAT
GTGCGTGGCGGCAAGATCGCCTTGTTTGGCGGTGCTGGTGTGGGCAAGACAGTGCTAATCCAGGAGATGATCAACCGCAT
CGCCCGTAATTTCGGTGGTACATCGGTGTTCGCCGGAGTTGGGGAGCGTACTCGCGAAGGCAATGACCTGTGGGTCGAGC
TTCAGGAAGTCAACGTGCTCAAGGACACCGCCCTGGTGTTCGGCCAGATGGATGAGCCTCCCGGCACCCGTATGCGGGTG
GCACTGTCCGCGCTGACGATGGCGGAGTGGTTTCGCGACGAGGCGAGCCAGGATGTTCTGCTGTTCATCGACAACATCTT
CCGATTCACCCAGGCTGGATCCGAAGTGTCGACGCTGCTCGGTCGTATGCCGTCGGCGGTAGGGTACCAGCCCACGCTGG
CTGACGAGATGGGTGAGCTGCAGGAACGCATCACCTCGACACGAGGCCGGTCGATCACCTCGATGCAGGCCGTCTATGTG
CCTGCCGATGACTACACTGACCCGGCGCCGGCAACGACGTTCGCGCACCTGGACGCCACTACTGAGCTGTCGCGTTCGGT
GTTTGCCAAGGGCATCTTCCCTGCAGTGGACCCGCTGGCGTCGAGCTCTACCATTCTCGACCCCGGTATTGTTGGTGAAG
AGCACTACCGTGTGGCCCAGGAAGTCATCCGGATTTTGCAGCGATACAAAGACCTCCAGGATATCATTGCGATCCTTGGC
ATCGACGAACTTTCTGAAGAGGACAAGCAATTGGTCAACCGAGCTCGGCGCATCGAGCGGTTTCTCTCTCAGAACATGAT
GGCGGCTGAACAATTCACTGGGCAGCCGGGTTCGACAGTTCCGGTGAAGGAGACCATCGACGCGTTCGACCGCTTGTGCA
AGGGAGAGTTCGACCATGTGCCCGAGCAGGCCTTCTTCTTGATTGGTGGTCTCGACGACTTGACCAAGAAGGCCGAGAGC
CTCGGCGCCAAGTTGTGA

Upstream 100 bases:

>100_bases
AGCGACAGGCCCAGATTACCCAAGAGATAAGCGAAATCGTAGGCGGAGCAAATGCACTCGCCAATGCCCGCTAGGTAGCC
CACAAGGAAACGAAGAGAAT

Downstream 100 bases:

>100_bases
CCCGGTCCAGCTAACAGCGAAAGGTGTTATGTATGGACGAATTGAACATCGAGATCGTTGCTGTTGACCGAAAGATCTGG
TCGGGCAAGGGCACCTTTTT

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MSTTKTTKMTVKTGSKGTSGRVVRVTGPVVDVEFPHGFVPELFNALNAKTTFSSLAKTLTLEVAQHLGDNLVRTISLQPT
DGLVRGVEVTDTGNSISVPVGEGVKGHVFNALGYCLDEPGYGDEFEHWSIHRKPPSFEELEPRTEMLETGLKVVDLLTPY
VRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLKDTALVFGQMDEPPGTRMRV
ALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYV
PADDYTDPAPATTFAHLDATTELSRSVFAKGIFPAVDPLASSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAILG
IDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPVKETIDAFDRLCKGEFDHVPEQAFFLIGGLDDLTKKAES
LGAKL

Sequences:

>Translated_485_residues
MSTTKTTKMTVKTGSKGTSGRVVRVTGPVVDVEFPHGFVPELFNALNAKTTFSSLAKTLTLEVAQHLGDNLVRTISLQPT
DGLVRGVEVTDTGNSISVPVGEGVKGHVFNALGYCLDEPGYGDEFEHWSIHRKPPSFEELEPRTEMLETGLKVVDLLTPY
VRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLKDTALVFGQMDEPPGTRMRV
ALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYV
PADDYTDPAPATTFAHLDATTELSRSVFAKGIFPAVDPLASSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAILG
IDELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPVKETIDAFDRLCKGEFDHVPEQAFFLIGGLDDLTKKAES
LGAKL
>Mature_484_residues
STTKTTKMTVKTGSKGTSGRVVRVTGPVVDVEFPHGFVPELFNALNAKTTFSSLAKTLTLEVAQHLGDNLVRTISLQPTD
GLVRGVEVTDTGNSISVPVGEGVKGHVFNALGYCLDEPGYGDEFEHWSIHRKPPSFEELEPRTEMLETGLKVVDLLTPYV
RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLKDTALVFGQMDEPPGTRMRVA
LSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVP
ADDYTDPAPATTFAHLDATTELSRSVFAKGIFPAVDPLASSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAILGI
DELSEEDKQLVNRARRIERFLSQNMMAAEQFTGQPGSTVPVKETIDAFDRLCKGEFDHVPEQAFFLIGGLDDLTKKAESL
GAKL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=469, Percent_Identity=60.9808102345416, Blast_Score=558, Evalue=1e-159,
Organism=Homo sapiens, GI19913424, Length=323, Percent_Identity=27.8637770897833, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI19913426, Length=355, Percent_Identity=23.3802816901408, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI19913428, Length=355, Percent_Identity=23.6619718309859, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI50345984, Length=424, Percent_Identity=25.2358490566038, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI4757810, Length=424, Percent_Identity=25.2358490566038, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI1790170, Length=463, Percent_Identity=58.963282937365, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI1788251, Length=303, Percent_Identity=30.6930693069307, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1790172, Length=319, Percent_Identity=26.3322884012539, Blast_Score=99, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI25144756, Length=483, Percent_Identity=58.3850931677019, Blast_Score=553, Evalue=1e-158,
Organism=Caenorhabditis elegans, GI17565854, Length=323, Percent_Identity=28.4829721362229, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=353, Percent_Identity=23.7960339943343, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570191, Length=352, Percent_Identity=23.5795454545455, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71988063, Length=400, Percent_Identity=25.5, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71988080, Length=400, Percent_Identity=25.5, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71988074, Length=448, Percent_Identity=23.6607142857143, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322581, Length=479, Percent_Identity=59.9164926931106, Blast_Score=560, Evalue=1e-160,
Organism=Saccharomyces cerevisiae, GI6319370, Length=369, Percent_Identity=27.3712737127371, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6319603, Length=364, Percent_Identity=25, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320016, Length=255, Percent_Identity=24.7058823529412, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24638766, Length=469, Percent_Identity=59.9147121535181, Blast_Score=552, Evalue=1e-157,
Organism=Drosophila melanogaster, GI28574560, Length=480, Percent_Identity=57.9166666666667, Blast_Score=535, Evalue=1e-152,
Organism=Drosophila melanogaster, GI20129479, Length=347, Percent_Identity=28.2420749279539, Blast_Score=112, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24583988, Length=348, Percent_Identity=27.0114942528736, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24583986, Length=348, Percent_Identity=27.0114942528736, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24583984, Length=348, Percent_Identity=27.0114942528736, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24583992, Length=323, Percent_Identity=27.5541795665635, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI281361666, Length=359, Percent_Identity=25.0696378830084, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646341, Length=359, Percent_Identity=25.0696378830084, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17136796, Length=359, Percent_Identity=25.0696378830084, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24658560, Length=357, Percent_Identity=24.9299719887955, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24638768, Length=95, Percent_Identity=46.3157894736842, Blast_Score=79, Evalue=1e-14,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 53035; Mature: 52904

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS00095 C5_MTASE_2 ; PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTKTTKMTVKTGSKGTSGRVVRVTGPVVDVEFPHGFVPELFNALNAKTTFSSLAKTLT
CCCCCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
LEVAQHLGDNLVRTISLQPTDGLVRGVEVTDTGNSISVPVGEGVKGHVFNALGYCLDEPG
HHHHHHCCCCCEEEEECCCCCCCEECEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCC
YGDEFEHWSIHRKPPSFEELEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLI
CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
QEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLKDTALVFGQMDEPPGTRMRV
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHH
ALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGEL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHH
QERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRSVFAKGIFPAVDPLA
HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHCCCC
SSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIER
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHH
FLSQNMMAAEQFTGQPGSTVPVKETIDAFDRLCKGEFDHVPEQAFFLIGGLDDLTKKAES
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEECCHHHHHHHHHH
LGAKL
HCCCC
>Mature Secondary Structure 
STTKTTKMTVKTGSKGTSGRVVRVTGPVVDVEFPHGFVPELFNALNAKTTFSSLAKTLT
CCCCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHH
LEVAQHLGDNLVRTISLQPTDGLVRGVEVTDTGNSISVPVGEGVKGHVFNALGYCLDEPG
HHHHHHCCCCCEEEEECCCCCCCEECEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCC
YGDEFEHWSIHRKPPSFEELEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLI
CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH
QEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLKDTALVFGQMDEPPGTRMRV
HHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHH
ALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGEL
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHH
QERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRSVFAKGIFPAVDPLA
HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCHHHCCCC
SSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAILGIDELSEEDKQLVNRARRIER
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHH
FLSQNMMAAEQFTGQPGSTVPVKETIDAFDRLCKGEFDHVPEQAFFLIGGLDDLTKKAES
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHEEEECCHHHHHHHHHH
LGAKL
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA