Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
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Accession | NC_011896 |
Length | 3,268,071 |
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The map label for this gene is ycjT [C]
Identifier: 221229595
GI number: 221229595
Start: 486272
End: 488650
Strand: Reverse
Name: ycjT [C]
Synonym: MLBr_00392
Alternate gene names: 221229595
Gene position: 488650-486272 (Counterclockwise)
Preceding gene: 221229596
Following gene: 221229591
Centisome position: 14.95
GC content: 62.34
Gene sequence:
>2379_bases ATGATCACCGAAGAAGCCTTCCCCGTAGAACCTTGGCAGATTCGCGAGACCCGGCTCGACCTGAACTTACTAGCCCAATC GGAATCCCTATTCGCCTTGTCCAACGGGCACATCGGGTTGCGCGGCAACCTCGACGAAGGCGAGCCGTACGGCCTGCCGG GAACCTATCTGAACTCCTTCTACGAAATCCGACCGCTGCCATATGCCGAAGCCGGATACGGGTATCCGGAGGCCGGTCAG ACCGTCGTAGACGTCACCAACGGCAAGATCTTGCGTCTGTTCGTCGAGGACGAGCCGTTCGACGTCCGCTACGGGGAAGT AATCTTCCACGAGCGAGTCCTCGACCTGTGCGCCGGAACGCTGACCCGCCGCGCAAATTGGCGCTCGCCCGCGGACAAGC AAGTTAAGGTGGTGTCCACCCGTTTGGTGTCGCTGGCGCACCGTAGTGTCGCAGCTATCGAGTACGTCGTCGAAGCGCTG GACAAATTCGTGCGCGTGACCGTACAGTCTGAGCTCGTCTCCAACGAGGACCAACCCGAGACCTCGGGCGACCCGCGAGT GTCAGCCATTCTAGATAACCCGCTAGAGGCCGTCGAACACGAAGCCACTGAGCGCGGCGGACTTCTCATGCACCGGACCC GGGCGAGCTCCTTAATGATGGCCGCCGGAATGGATCACGAGGTCGAGGTTCCCGGACGAGTCGAGATCACCACCGACGCG CGTCCAGACTTGGCTCGGACCACCGTGATCTGCGGTCTGCGCCCAGGACAGAAGCTGCGCATCGTCAAATACCTGGCGTA CGGCTGGTCAAGTCTGCGCTCCCGCCCAGCGCTGCATGACCAGGCCACCGCCGCACTGCACACCGCCCGCTACAGTGGAT GGCAAGGATTGCTGGACGCGCAGCGCGCTTACCTCAACGAATTCTGGGACAGCGCCGACGTCGAAGTCGAGGGCGACCCG GAATCTCAGCAAGCAGTGCGGTTCGGGCTATTTCACCTGCTGCAGGCCAGCGCGCGCGCCGAACGGCGTGCTATCCCCAG CAAGGGACTCACCGGAACAGGCTACGACGGCCACGCTTTTTGGGATACCGAAGGTTTCGTGTTGCCAGTGCTTACCTACA CCGCGCCGCATGCAGTCGCCGATGCGCTGCGGTGGCGTGCGTCGACATTACAGCTCGCCAAAGACCGGGCAGCCGAACTC GGGCTCGACGGTGCCAGCTTTTGCTGGCGAACCATCCGCGGGCAGGAGTGCTCGGCGTACTGGCCGGCGGGCACGGCGGC TTGGCACATCAACGCCGACATAGCGATGGCCTTCGAGCGATACCGCATTGTTACCGGTGACCACTCGTTGGAGGAAGAAT GCGGCCTTGCTGTGCTCATCGAGACGGCCCGGCTGTGGCTTTCACTCGGACACCACGACCGGCATGGTGTCTGGCACCTC GATGGGGTCACCGGTCCCGACGAGTACACGGCGGTGGTCCGTGACAACGTGTTCACGAATCTAATGGCCGCGAGCAATCT GATCACCGCTGCTGATGCCTGCCTACGCCAGCCCGAAGCGGCAAAAGCAATGGGTGTCACAACCGAAGAGATGGCCGCTT GGCGCGACGCGGCCGACGCCGCCAACATTCCGTACGACGACGAGCTCGGTGTCCATCAGCAGTGTGAAGGGTTTACCACC TTTGCGGAGTGGGATTTTGAAGCCAACACCACCTACCCATTATTCCTGCACGAAGCCTACGTACGGCTCTACCCAGCACA AGTAATCAAGCAAGCCGACCTGGTGCTGGCGATGCAGTGGCAAAGTCATGCGTTCACCCCCGAACAAAAGGCGCGCAATG TCGACTACTACGAACGACGCATGGTGCGTGACTCATCGCTGTCAGCCTGCACACAGGCGGTGATGTGTGCCGAGGTCGGA CATCTAGAGTTGGCCCACGACTATGCTTACGAGGCCGCGCTGATCGACCTGCGCGATCTGCACCGCAATACCCGTGACGG GTTGCACATGGCCTCACTCGCCGGTGCGTGGACAGCTCTAGTCGGGGGCTTCGGCGGCCTGCGTGACGATGAGGGCATCC TGTCCATCGATCCCCAACTGCCCCACGGCATCTCGCGTCTACGATTCCGACTACGCTGGCGCGGGTTCCGACTGACCGTG GACGCCAGGCATGCCGACGTCACCTACACCCTGCGCGACGGCCCTGGCGGCGAGCTAACCATCCGGCATGCCGGTGAACA CCTCACACTGAAATCGGATTCACCGTCGACCATAGCGGTACGGGACCGAAAGCCACTCCTGCCGCCTCCATCACAGCCGC CGGGCCGCGAGCCAGTAAGCCGGCGCCATAAGTCGCTCATAATCAGTGCGGCTCGATGA
Upstream 100 bases:
>100_bases AACCGCACGGGTCGGGTAGACCAGGCCGAAGAACTGCGCCGCATCGGCGCCAATGTAGTGGTGACCGATCTCGCTGAACT ACTGTAGGGCATCATCCCCG
Downstream 100 bases:
>100_bases GCCAGGCCACCTCGGCGTGCACGGCCCGCTGAAGCTGCGCTTCGGTCAGGTCGGCGATACCGATAACCGAATGCAGCATA GGAGTAAATAATTGCTAACC
Product: putative sugar phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MITEEAFPVEPWQIRETRLDLNLLAQSESLFALSNGHIGLRGNLDEGEPYGLPGTYLNSFYEIRPLPYAEAGYGYPEAGQ TVVDVTNGKILRLFVEDEPFDVRYGEVIFHERVLDLCAGTLTRRANWRSPADKQVKVVSTRLVSLAHRSVAAIEYVVEAL DKFVRVTVQSELVSNEDQPETSGDPRVSAILDNPLEAVEHEATERGGLLMHRTRASSLMMAAGMDHEVEVPGRVEITTDA RPDLARTTVICGLRPGQKLRIVKYLAYGWSSLRSRPALHDQATAALHTARYSGWQGLLDAQRAYLNEFWDSADVEVEGDP ESQQAVRFGLFHLLQASARAERRAIPSKGLTGTGYDGHAFWDTEGFVLPVLTYTAPHAVADALRWRASTLQLAKDRAAEL GLDGASFCWRTIRGQECSAYWPAGTAAWHINADIAMAFERYRIVTGDHSLEEECGLAVLIETARLWLSLGHHDRHGVWHL DGVTGPDEYTAVVRDNVFTNLMAASNLITAADACLRQPEAAKAMGVTTEEMAAWRDAADAANIPYDDELGVHQQCEGFTT FAEWDFEANTTYPLFLHEAYVRLYPAQVIKQADLVLAMQWQSHAFTPEQKARNVDYYERRMVRDSSLSACTQAVMCAEVG HLELAHDYAYEAALIDLRDLHRNTRDGLHMASLAGAWTALVGGFGGLRDDEGILSIDPQLPHGISRLRFRLRWRGFRLTV DARHADVTYTLRDGPGGELTIRHAGEHLTLKSDSPSTIAVRDRKPLLPPPSQPPGREPVSRRHKSLIISAAR
Sequences:
>Translated_792_residues MITEEAFPVEPWQIRETRLDLNLLAQSESLFALSNGHIGLRGNLDEGEPYGLPGTYLNSFYEIRPLPYAEAGYGYPEAGQ TVVDVTNGKILRLFVEDEPFDVRYGEVIFHERVLDLCAGTLTRRANWRSPADKQVKVVSTRLVSLAHRSVAAIEYVVEAL DKFVRVTVQSELVSNEDQPETSGDPRVSAILDNPLEAVEHEATERGGLLMHRTRASSLMMAAGMDHEVEVPGRVEITTDA RPDLARTTVICGLRPGQKLRIVKYLAYGWSSLRSRPALHDQATAALHTARYSGWQGLLDAQRAYLNEFWDSADVEVEGDP ESQQAVRFGLFHLLQASARAERRAIPSKGLTGTGYDGHAFWDTEGFVLPVLTYTAPHAVADALRWRASTLQLAKDRAAEL GLDGASFCWRTIRGQECSAYWPAGTAAWHINADIAMAFERYRIVTGDHSLEEECGLAVLIETARLWLSLGHHDRHGVWHL DGVTGPDEYTAVVRDNVFTNLMAASNLITAADACLRQPEAAKAMGVTTEEMAAWRDAADAANIPYDDELGVHQQCEGFTT FAEWDFEANTTYPLFLHEAYVRLYPAQVIKQADLVLAMQWQSHAFTPEQKARNVDYYERRMVRDSSLSACTQAVMCAEVG HLELAHDYAYEAALIDLRDLHRNTRDGLHMASLAGAWTALVGGFGGLRDDEGILSIDPQLPHGISRLRFRLRWRGFRLTV DARHADVTYTLRDGPGGELTIRHAGEHLTLKSDSPSTIAVRDRKPLLPPPSQPPGREPVSRRHKSLIISAAR >Mature_792_residues MITEEAFPVEPWQIRETRLDLNLLAQSESLFALSNGHIGLRGNLDEGEPYGLPGTYLNSFYEIRPLPYAEAGYGYPEAGQ TVVDVTNGKILRLFVEDEPFDVRYGEVIFHERVLDLCAGTLTRRANWRSPADKQVKVVSTRLVSLAHRSVAAIEYVVEAL DKFVRVTVQSELVSNEDQPETSGDPRVSAILDNPLEAVEHEATERGGLLMHRTRASSLMMAAGMDHEVEVPGRVEITTDA RPDLARTTVICGLRPGQKLRIVKYLAYGWSSLRSRPALHDQATAALHTARYSGWQGLLDAQRAYLNEFWDSADVEVEGDP ESQQAVRFGLFHLLQASARAERRAIPSKGLTGTGYDGHAFWDTEGFVLPVLTYTAPHAVADALRWRASTLQLAKDRAAEL GLDGASFCWRTIRGQECSAYWPAGTAAWHINADIAMAFERYRIVTGDHSLEEECGLAVLIETARLWLSLGHHDRHGVWHL DGVTGPDEYTAVVRDNVFTNLMAASNLITAADACLRQPEAAKAMGVTTEEMAAWRDAADAANIPYDDELGVHQQCEGFTT FAEWDFEANTTYPLFLHEAYVRLYPAQVIKQADLVLAMQWQSHAFTPEQKARNVDYYERRMVRDSSLSACTQAVMCAEVG HLELAHDYAYEAALIDLRDLHRNTRDGLHMASLAGAWTALVGGFGGLRDDEGILSIDPQLPHGISRLRFRLRWRGFRLTV DARHADVTYTLRDGPGGELTIRHAGEHLTLKSDSPSTIAVRDRKPLLPPPSQPPGREPVSRRHKSLIISAAR
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family
Homologues:
Organism=Homo sapiens, GI187829418, Length=530, Percent_Identity=26.9811320754717, Blast_Score=126, Evalue=7e-29, Organism=Escherichia coli, GI1787575, Length=771, Percent_Identity=26.5888456549935, Blast_Score=211, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6325283, Length=220, Percent_Identity=25.4545454545455, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24583760, Length=281, Percent_Identity=29.1814946619217, Blast_Score=93, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y392_MYCLE (Q49736)
Other databases:
- EMBL: U00015 - EMBL: AL583918 - PIR: S72831 - RefSeq: NP_301380.1 - ProteinModelPortal: Q49736 - SMR: Q49736 - EnsemblBacteria: EBMYCT00000029273 - GeneID: 909082 - GenomeReviews: AL450380_GR - KEGG: mle:ML0392 - NMPDR: fig|272631.1.peg.252 - Leproma: ML0392 - GeneTree: EBGT00050000017221 - HOGENOM: HBG727686 - OMA: NADIVYA - ProtClustDB: CLSK872178 - BioCyc: MLEP272631:ML0392-MONOMER - InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 - Gene3D: G3DSA:1.50.10.10 - Gene3D: G3DSA:2.70.98.40 - PIRSF: PIRSF036289
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N; SSF74650 Gal_mut_like; SSF48208 Glyco_trans_6hp
EC number: 3.2.1.- [C]
Molecular weight: Translated: 88088; Mature: 88088
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITEEAFPVEPWQIRETRLDLNLLAQSESLFALSNGHIGLRGNLDEGEPYGLPGTYLNSF CCCCCCCCCCCCEEHHHEECEEEEECCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHCE YEIRPLPYAEAGYGYPEAGQTVVDVTNGKILRLFVEDEPFDVRYGEVIFHERVLDLCAGT EEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH LTRRANWRSPADKQVKVVSTRLVSLAHRSVAAIEYVVEALDKFVRVTVQSELVSNEDQPE HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSGDPRVSAILDNPLEAVEHEATERGGLLMHRTRASSLMMAAGMDHEVEVPGRVEITTDA CCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEECCC RPDLARTTVICGLRPGQKLRIVKYLAYGWSSLRSRPALHDQATAALHTARYSGWQGLLDA CCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHH QRAYLNEFWDSADVEVEGDPESQQAVRFGLFHLLQASARAERRAIPSKGLTGTGYDGHAF HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE WDTEGFVLPVLTYTAPHAVADALRWRASTLQLAKDRAAELGLDGASFCWRTIRGQECSAY ECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEE WPAGTAAWHINADIAMAFERYRIVTGDHSLEEECGLAVLIETARLWLSLGHHDRHGVWHL CCCCCEEEEECCHHEEEEEEEEEEECCCCCHHHCCEEEEHHHHHHHHHCCCCCCCCEEEE DGVTGPDEYTAVVRDNVFTNLMAASNLITAADACLRQPEAAKAMGVTTEEMAAWRDAADA CCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCC ANIPYDDELGVHQQCEGFTTFAEWDFEANTTYPLFLHEAYVRLYPAQVIKQADLVLAMQW CCCCCCCCCCCHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEEC QSHAFTPEQKARNVDYYERRMVRDSSLSACTQAVMCAEVGHLELAHDYAYEAALIDLRDL CCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH HRNTRDGLHMASLAGAWTALVGGFGGLRDDEGILSIDPQLPHGISRLRFRLRWRGFRLTV HCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHEEEEEEEEEEEEE DARHADVTYTLRDGPGGELTIRHAGEHLTLKSDSPSTIAVRDRKPLLPPPSQPPGREPVS ECCCCEEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHH RRHKSLIISAAR HHHHEEEEEECC >Mature Secondary Structure MITEEAFPVEPWQIRETRLDLNLLAQSESLFALSNGHIGLRGNLDEGEPYGLPGTYLNSF CCCCCCCCCCCCEEHHHEECEEEEECCCCEEEEECCCEEEECCCCCCCCCCCCHHHHHCE YEIRPLPYAEAGYGYPEAGQTVVDVTNGKILRLFVEDEPFDVRYGEVIFHERVLDLCAGT EEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH LTRRANWRSPADKQVKVVSTRLVSLAHRSVAAIEYVVEALDKFVRVTVQSELVSNEDQPE HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSGDPRVSAILDNPLEAVEHEATERGGLLMHRTRASSLMMAAGMDHEVEVPGRVEITTDA CCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEECCC RPDLARTTVICGLRPGQKLRIVKYLAYGWSSLRSRPALHDQATAALHTARYSGWQGLLDA CCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHH QRAYLNEFWDSADVEVEGDPESQQAVRFGLFHLLQASARAERRAIPSKGLTGTGYDGHAF HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE WDTEGFVLPVLTYTAPHAVADALRWRASTLQLAKDRAAELGLDGASFCWRTIRGQECSAY ECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEE WPAGTAAWHINADIAMAFERYRIVTGDHSLEEECGLAVLIETARLWLSLGHHDRHGVWHL CCCCCEEEEECCHHEEEEEEEEEEECCCCCHHHCCEEEEHHHHHHHHHCCCCCCCCEEEE DGVTGPDEYTAVVRDNVFTNLMAASNLITAADACLRQPEAAKAMGVTTEEMAAWRDAADA CCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCC ANIPYDDELGVHQQCEGFTTFAEWDFEANTTYPLFLHEAYVRLYPAQVIKQADLVLAMQW CCCCCCCCCCCHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEEC QSHAFTPEQKARNVDYYERRMVRDSSLSACTQAVMCAEVGHLELAHDYAYEAALIDLRDL CCCCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH HRNTRDGLHMASLAGAWTALVGGFGGLRDDEGILSIDPQLPHGISRLRFRLRWRGFRLTV HCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHEEEEEEEEEEEEE DARHADVTYTLRDGPGGELTIRHAGEHLTLKSDSPSTIAVRDRKPLLPPPSQPPGREPVS ECCCCEEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHH RRHKSLIISAAR HHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002